Drosophila miranda: 117191931
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Entry
117191931 CDS
T06132
Name
(RefSeq) pre-mRNA-processing-splicing factor 8-like
KO
K12856
pre-mRNA-processing factor 8
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117191931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
117191931
Spliceosome [BR:
dmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117191931
Complex C
U5 SnRNP specific factors
117191931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
117191931
NCBI-ProteinID:
XP_033252569
LinkDB
All DBs
Position
Y
Genome browser
AA seq
2397 aa
AA seq
DB search
MSIPPYMIPQNAWAAQLMAQQAYAAAHAQQAQLQAQQQMANQIQQIPPPGAPSPPASGHS
SGIPIPAGVQGQSGLGQIPTPKPDILTEDKLQEKALKWQNLQAKRFAEKRKFGFVDTQKE
DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVL
YHITGAITFVNEIPWVIEPAYIAQWGTIGIMMRREKRDRRHFKRMRFPPFDDEEPPLDYA
DNVLDVEPLEAIQIELDNDEDNAVFKWFYDHRPLVDTPYVNGSTYRKWNLSLPQLATLYR
LANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDNNVGDEDWNEFNDIN
KVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIS
HRNVNSKLQEPLPDDDDDFTLPDEVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSR
RAIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKAT
KFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGI
NNLQEVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINY
KDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFHDSVT
ETAHPIRLYCRYVDHIHLFFRFSAEEARDLIQRYLTEHPDPNNENIDEYHNKKCWPRDAR
MRLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPK
CRTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIR
TEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKS
YKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERY
ARAKFLDYTTDNMSIYPSPTGILIAIDLAYNLQSAYGNWFPGCKTLIQQAMAKIMKANPA
LYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNL
YDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITVADHFWPTLTDEEWIKV
EVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQL
TATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILSKNILKKFVTISDLRAQISGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINL
PNTLPTHQYLTDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFT
PGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSW
NYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtccattccgccgtacatgataccgcaaaatgcatgggccgctcaattgatggcccag
caggcatacgcggctgcacacgcacagcaggcacaattgcaggcgcagcagcagatggcc
aaccagatacaacaaataccgccaccaggagcaccctcaccgccagccagcggccattct
agtggcataccaattccggccggagtccaggggcagtctgggctggggcaaattcccacg
ccaaagccggacatacttacggaggataaactgcaggagaaggcgctaaagtggcagaat
ctgcaggccaagcgtttcgctgagaagcgaaagttcggcttcgtcgacacacagaaggag
gacatgccgccggagcatataagaaaaattatacgcgatcatggtgacatgacctcgcgc
aagtatcgccatgacaagcgggtttatttgggcgctctgaagtacatgccacatgcagtg
ctgaagctgctggaaaatatgcccatgccatgggagcagatccgggacgtacaggtgctg
taccatatcactggtgccataacctttgttaacgaaataccatgggttattgagccggct
tacattgctcagtggggaacaatagggataatgatgcgtcgcgagaagcgtgatcgtcgc
cacttcaagcgtatgcgatttccgccgtttgacgatgaagaaccgccgctggactatgcg
gacaacgtactggatgtggagccattggaagccattcaaattgagctcgataatgatgaa
gacaatgccgtgttcaaatggttctacgaccatcgtcccctcgtagacacgccctatgtg
aatgggtccacctaccgcaagtggaatctgtccctgcctcaattggctactctttatcgc
ctggcgaaccagttgctcacggacctggtcgacaacaacttcttttacctatttgacccg
aagagtttctttaccgcgaaggctctgaacatggccatcccgggcgggcccaaattcgag
ccactcatcaaggataataatgttggcgatgaggactggaacgagttcaacgacataaat
aaggtgatcatccgccaaccgattcgcacggagtatcgtattgcttttccctacctgtac
aacaatatgccgcactttgtgcatctaagctggtatcacacacccaacgtggtctacatc
aagactgaagatcccgatttgcctgcgttttattttgatccgctcatcaatcccatttcg
catcgcaatgtaaattccaagctgcaggaacccctgcctgatgacgatgatgactttacg
ctcccggatgaagtgcagccgttcctgcaggacacgccgctctacaccgacaacaccgcc
aatggaattgctttgctatgggctccgcgccctttcaacatgcgttccggtcgctcccgt
cgagccattgatgtgccgttggtcaagtgctggtacaaggagcactgtccacctggacat
ccggtcaaggtgcgcgtcagctatcagaaattgctgaaatattatgtactaaatgctctg
aagcaccgaaagcccaagccgcaaaagaaacgatacctgttccggtccttcaaggccaca
aagttcttccagaccaccacgttggattgggttgaggctggattgcaggtgtgccgtcag
ggatacaacatgctaaatctcttgattcatcgcaaaaatcttaactatttacatctggac
tataatttcaacttgaagccggtcaagacattgactaccaaagagcgcaaaaagtcacgt
ttcggcaacgcgtttcatttgtgccgagagatcctgcgtctgaccaagctcatcatcgac
tcccacgtgcagtatcgcttgaataatgtggatgctttccagctatccgatggcctgcag
tacatattcgcgcatgtcggtcagctcactggcatgtatcgttataagtacaagctgatg
aggcagataagaatgtgcaaggatctgaagcatttgatctactaccgcttcaacacggga
cccgtgggcaagggacccggttgtggtttctgggcacccggatggcgggtgtggctattc
tttatgcgcggcatcactcccctgctggaacgctggctgggaaatctgctgtcccgtcag
ttcgaaggacgccactccaagggcgtagccaaaaccgtgaccaagcagcgcgtcgagtcg
cacttcgatctggagctgcgagcctctgttatgcacgacatcgtggacatgatgcctgag
ggcattaagcaaaacaaggctcgcaccattctgcagcatctgtcggaggcttggcgctgc
tggaaagccaacattccgtggaaggtgcccggcctccccatacccatcgagaatatgatc
cttcgctatgtgaaaatgaaggcggactggtggacaaacacggcccactacaaccgagag
cgcatccgacgaggtgctaccgtggataagaccgtatgtaagaagaatctgggccgcctc
actcgtctctacctgaaggcggagcaggaaagacaacacaactacctcaaggatggtcca
tacatatcgccagaggaggcggtggccatctacaccaccacagtgcactggctggagtcc
cgtcgctttgcgcccatcccattccctccgctgtcctacaagcacgacacaaaattgctg
atccttgcactcgagcgactaaaagaggcctacagcgtgaagtcgcgcttgaatcaaagc
cagcgtgaggagcttggtctcatcgaacaagcctacgataatcctcacgaggcattgtct
cgtatcaagcgtcatctgctgacgcagcgggctttcaaagaggtggggatagagttcatg
gacctgtacagccatctgatacccgtgtatgaggtggaaccgctggagaagatcacggac
gcatatctcgaccagtacctctggtacgaggcagacaagcggaggctctttcccccctgg
atcaagcccagcgacacagagcccccgccgctcctggcctataagtggtgtcaaggcatc
aacaatcttcaggaggtctgggatgtgggcgagggcgagtgcaatgtgctgctggagtcg
cgctttgagaagctatacgagaagattgacttgaccctgcttaaccgccttctgcgcctg
atcgtggaccataatatcgccgattatatgacggccaagaacaatgttgtgatcaactac
aaggacatgaaccacaccaacagttatggcatcatccgtggcctgcagttctcctcgttc
ataacgcaatactatggcttggttctggacctcctggtgctgggcctgcatcgatccagc
gagatggccggacctccgcaaatgcccaatgattttcttacctttcatgactcagtcacg
gagacggcacatcctattcgactgtattgtcgctacgtcgatcacatacacttgtttttc
agattctcggcggaggaggcgcgagacctcatccagcggtatctcaccgagcatcccgat
cccaacaatgaaaacattgacgaataccataacaagaaatgctggccccgcgatgctcgt
atgcgtttaatgaaacacgacgtcaatctaggccgcgccgtcttctgggacattaagaac
cgcttgccgcgctctgttaccaccattggctgggaaagcacctttgtttcggtctattcc
aaggacaatccgaacttgctgttcaacatgagcggctttgagtgtcgaatcttgccaaag
tgtcgcacccaaaacgaagagttcacacatcgcgatggcgtgtggaatctgcagaacgaa
ataaccaaggagcgcacagctcaatgcttcctgcgtgtggacgatgaatcgctgggacgc
ttccacaatcgcgtgcgccagatcttgatggcttccggttccaccacgtttacaaagatt
gttaacaaatggaacacggccctcattggcctgatgacgtacttccgcgaggctgttgtc
aatacccaggagttgctggatttactggtcaagtgtgagaacaagattcagacgcgcatc
aagattggccttaactcgaaaatgccctcgcgctttccgcccgtcgttttctacacccca
aaggagctgggaggtctcggcatgttgagcatgggccacgttctcattccgcaatccgat
ctgcgctggtccaagcagacggatgtgggaataacccacttccgatcgggcatgtcccat
gacgaggatcagcttattccgaatctgtatcgctacattcagccgtgggagagtgagttc
atcgattcgcagcgcgtctgggcggagtatgcgctgaagcgccaggaggcaaatgctcag
aaccgtcgcctcacgctggaggacctcgaggacagctgggatcggggtattcctcggatc
aacacgcttttccagaaggaccgccacactctggcctatgacaagggctggcgcatacgc
accgagttcaagcagtatcaggtgctgaagcaaaaccccttctggtggacccatcaacgc
cacgacggcaagttgtggaacctgaacaactatcgcacggatatgatccaagcgctgggc
ggcgtggagggaattctcgagcacactctgttcaagggcacctatttccccacctgggag
ggtctgttctgggagaaggcctctggcttcgaggagtccatgaagtacaagaaactgacc
aatgcacagcgctctggtctgaatcagatcccgaatcgtcgcttcacactctggtggtcg
ccgacgatcaaccgcgccaatgtctatgtgggcttccaggtgcagttggatctgactggc
atattcatgcatggcaaaattccgacgctcaagatttcgctgattcaaattttccgtgcc
catttgtggcagaagatacacgagtccattgtgatggacttgtgccaggtgtttgatcaa
gagctggacgctcttgaaatcgaaacggtgcagaaggagacgatccatccgcgtaagtcc
tacaagatgaactcctcctgtgccgacattttactcttccccgcctataagtggaacgtg
tcgcgaccctctctgttggccgacaccaaggacaccatggacaacacgaccactcagaag
tattggctagacattcaactgcgctggggagactatgattcccacgatgtggagcgttac
gcgagggccaagttccttgattacaccacagacaacatgtccatttatccctcgcccacg
ggtatcctgattgccattgatctggcctacaatctgcagtcagcatatggaaattggttc
cctggctgcaagactctcatccagcaggccatggccaaaatcatgaaggccaatccggcc
ctctatgtcctgcgagagcgcatccgcaaggctctgcagctgtactcctcagagccaacg
gaaccctacttgagctcacagaactatggcgaacttttctcaaatcagatcatctggttt
gtcgacgacaccaacgtgtaccgcgtcaccatccataagacattcgagggcaatttgaca
acgaagccgataaacggcgcaatctttatattcaatccccggacgggccagcttttccta
aagattatccacacttcggtatgggcggggcagaaacgtttgggtcagttggccaagtgg
aagacggctgaagaggtggctgccctgattcgctcgctgcccgtggaggagcagccgaaa
cagatcattgtgacgcgcaagggtatgcttgatcctctcgaggttcatttgctcgacttt
cccaacatcgtcatcaaaggctctgagctgcagttgcccttccaggcctgcttgaaagtg
gagaagtttggtgatctgattctcaaggccaccgagccccaaatggtgctctttaatctt
tacgacgactggctgaagacaatttcctcgtacacggcgttcagccgtctcattttgatc
ctacgagccctgcatgtgaatacggagcgcaccaagatcatcctaaagccagacaagacc
actattaccgtggccgatcatttctggccaacattgacggatgaggagtggatcaaggtg
gaggtgcagctcaaggatctcattttagccgactacggaaagaagaacaacgtgaacgtg
gcctcactcacacagtcggagatccgcgacattattctcggcatggagatcagtgcgcca
tcggcgcaacgtcagcagatagcagagatcgagaagcagacaaaggagcagaatcaactg
acggcgaccaccacgcgcaccacaaacaaacacggcgacgagatcatcacttccaccaca
tccaattacgagacgcagactttcagctcgaagactgagtggcgcgtgcgagccatctct
gccacgaatctgcatttgcgaacgaatcacatatatgtcagctccgatgacatcaaggaa
actggctatacttacattctgtccaagaacatactcaagaagttcgtcaccatctccgat
ttgagagcgcagatttcgggatatctttacggcgtaagtccgccggacaacccgcaggtg
aaggagattcgctgcattgtgatgcctccacaatggggcacgcaccagacaattaacctt
cccaacaccctgcccacccatcagtacctcacggacatggaaccgttgggctggatccac
acgcagcccaacgagttgccccagctatcgccgcaggacatcacgacccatgccaagatc
atgcaggagaactccaactgggacggcgaaaagacgattgtaattacctgctccttcact
cccggctcttgctcgctgaccgcttacaaactgaccccgtcgggcttcgagtggggctct
aagaacacggacaagggaaacaaccccaagggctacctgccttctcactacgaaagagtt
cagatgctgctgtcgaacaagttccttggcttcttcatggtgcccgcgcagagcagctgg
aactacaatttcatgggagtgcggcacgatcccaacatgaagtacgaactgcagctggcc
aacccaaaggagttctaccacgaactgcaccgcacgtcgcacttcctgcttttctcgaac
ctcgaggatggtggcgatggcgccggcgcggatcgtgaggatgtctatgcgtag
DBGET
integrated database retrieval system
