Drosophila miranda: 117192219
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Entry
117192219 CDS
T06132
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
117192219
03041 Spliceosome [BR:
dmn03041
]
117192219
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117192219
Spliceosome [BR:
dmn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117192219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117192219
NCBI-ProteinID:
XP_033252776
LinkDB
All DBs
Position
Y
Genome browser
AA seq
1362 aa
AA seq
DB search
METVVDFNNELSGLYYSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV
PGLYVIDSIVRQSRHQYGSEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN
NVFKSDVIQPIFDLADPNHPIYHQMQMQMQMGGGAGPGGNVGPGPSSSGALSLADISSGP
NGLNTSGLSNMDLSMNSGAGDDKMGGVPDLSMCHEKSYGGGVSSSSLKRHHSDQHYMKRQ
SGSSSKSHHHKYSKTSHEIDYDVRSIMDDEEDNMQRMMADDHHHHHGHHCMGNDSPPTSS
NLLDNNNLKQLLNDPNVLRQLQTLQNFQKFKQQEENQKMRYQDDALQQHLQNVLKGTAGM
PPGMGMGMGMGMNLNHSDGQDMNKDVEFISEQQSIEVINLDGADSRSPTPDRERYKRSRR
NSSRSRSRSPRGRGAGGGGGGGGGNGNDRRRRGSRSRSHSPCSSRRRGSRDRERMERSYR
DKERDREHERERRKKGLPDIKKDHLSVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSID
QIVPRGCAFIVMNRRQDAHKAMQSLKNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGV
TYIPWNKLSPETDLDTLEEGGMFDEDTMPSWIKQKLNQAKNVGKEKNTASTPETATASVP
GPPPGLMFGIDTTQPPPVGPVGPVGPPPPLGSGAQPPPGLMGMVRGQYPMAPPMGIGMPP
PMMMPPTNMPPPMMMPTTTMPPPMMMPPGMMPPGFPGMGGPPHPMGMPHGGPFPPPGAVL
PPMAAGAPPAGNSGNISDDQMDIEMDLEDAPPPMPPQQQQQQDSFNPPMANPNNVEAVVA
AAANEMFQRERERSRGPGGGGGSRWGGRDDVAEAAERWRAENGGGPVGAGPVPGAGPNAA
FNEARARLNLNPLEHGMQRPDFMGADFDNHGGPGPRGMGPRSGNLNGGGGPGGPGGDFFP
PNISNSRFNQPTSLMQMRIPPPAAFNQRMGGPPNNAGNGGAVGPMFMRNQGGNGGGPGGP
GGPGGPGGRQQGQGPGFFNPRNPFNDNQRGRGGPGVNARNASTGGGGRGRWSDDEDEVGN
NFNKRRAGPGGPGGNRFRGDREGEIPDDRRGNNARGGRGPREERDRPRFGNRRGSRDDSS
RHSMSSTDEGNSKPMSETDSREKNRETPLSSTNSLSVPTPAQASAPAPATAETADTEEDW
DRELQDYEGRMEAEQAAKAERDVPEVTPVGAEQRAASGSPVDNFARPAEVANDFPALKQS
DASPACTPLYDELPPPSATTPALAPAEPESRVEVPAEAEAEAAPPQKPEFIRTEAVPKDE
SPSTPAPALEIQDEAPKMDATQSEAPLSEESSNPAVTVEAEA
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgttgtggatttcaacaatgagctctccggactctattacagccgaccgccc
atatccaaggccaaaatggccgcaattacgaagtcagcaatgcgagccatcaagttctat
aagcatgtcgtccagagcgtggagaagttcatattgaagtgcaagccggagtacaaggtg
ccgggcctgtatgttatcgactcgattgtgcgtcaatcgcgccaccagtacgggtccgag
aaggatgtattcgccccccgcttccagcgaaacctcacagagacctttgccaatctcttc
cgctgtgctcccgaagataagagccgcatcattcgcgtcctcaatctctggcagaagaac
aatgttttcaagtcggacgtcatccaacccatcttcgatctggccgaccccaaccacccc
atttaccatcaaatgcaaatgcaaatgcaaatgggcggtggagccggacccggtggcaat
gtggggcctggtcccagcagcagtggcgcccttagtctggccgatatctccagtgggcct
aatggcctcaacacctctggattgagcaacatggacctgagcatgaacagtggcgcggga
gacgacaaaatgggcggggtgcccgatttatcgatgtgtcatgagaaatcctacggtggc
ggtgtcagcagtagcagcttaaagcgtcatcattcggatcagcattatatgaagcgtcaa
tcgggatcgtccagcaagtcgcatcatcacaaatatagcaagacctcgcacgaaatcgac
tacgatgtgcgctcgatcatggacgacgaggaggacaacatgcagcggatgatggccgat
gatcatcatcatcatcatggccatcactgcatgggcaacgactcgccccctacttcatcc
aatctgctagacaacaacaatctcaaacaactgctcaacgatccgaatgtgctgcgacag
ctgcagacactgcagaatttccagaagttcaagcaacaggaggaaaaccaaaagatgcgc
taccaggacgatgccctccaacagcatttgcagaacgtgttgaagggcactgctggcatg
ccccctgggatgggaatgggcatgggcatgggcatgaacctcaaccacagtgacgggcag
gacatgaacaaggacgtggagttcatttcggagcagcagtcgattgaggtgatcaatctg
gatggggccgattcgcggagtccaacgcccgaccgggagaggtacaagcggagccggagg
aacagcagccgcagtcgttctcgctcaccacgtggacgaggtgctggtggtggcggcggg
gggggaggcggcaatggcaacgatcgacgtcgtcgcggatcccgatcgcgcagtcattca
ccttgttccagtcgacgccgaggatcgcgggaccgcgagcgcatggaacgcagctatcgg
gacaaggagcgtgaccgggagcatgagcgtgagcgccgcaagaaggggctgcctgatatt
aaaaaggatcacctcagtgtttgcagcaccaccttgtgggtgggccatctgtccaagctg
gtctaccaggaggagctgtccgacacctttggggagtacggcgacatagtaagcatcgat
cagattgtgccacgcggatgcgcattcatagtgatgaatcgtcgccaggatgcgcacaag
gccatgcaatcgctgaagaatcacaagctccagggacgggccataaccatctcctgggcc
gccggcaagggggtgaagagcaaggagtggaaggacttctgggacctggagctgggcgtt
acgtacataccctggaacaagctgagtccggagacggatctcgacaccctcgaggagggc
ggcatgttcgacgaggacaccatgcccagctggattaagcagaagctcaatcaggccaaa
aatgtcggcaaggagaagaacacggcgtccactccagagaccgctacggcatccgttcct
ggcccaccgccaggactaatgttcggcatcgatacaacacagccgcctccagtgggaccc
gtgggtccagtgggtccacccccaccgctcggctccggcgcacaacctccgcccggactc
atgggtatggtgagaggccagtaccccatggctccgcccatggggataggcatgccgcct
ccgatgatgatgccaccgacaaatatgccgccaccgatgatgatgccgacgacaaccatg
cctccaccaatgatgatgccaccgggcatgatgccgcccggttttccaggaatgggtgga
ccccctcatcctatgggtatgcctcacggaggcccatttccgccgcccggagcagtgcta
cctcctatggccgccggcgccccacccgcgggcaacagtggtaatataagcgacgatcaa
atggacattgaaatggatctggaggatgccccgcccccgatgccaccacagcaacagcag
cagcaggacagcttcaatccgcctatggccaatcccaacaatgtggaggcagtggtggct
gccgctgccaacgagatgttccagagggaacgggagcgttcccgcggcccaggcggcggc
ggcggctcacgttggggcggacgcgatgacgtggcagaagctgccgaacgctggagagcc
gaaaacggcggtggaccggtgggagctggtcctgtacctggggctggaccaaatgccgca
ttcaatgaggcgcgagctcgacttaacctgaatccacttgagcatggaatgcagaggcca
gactttatgggcgcggactttgataatcacggtggaccgggtcctcgtggaatggggcca
cgcagtgggaacctaaatggaggcggaggaccgggtggaccaggaggagacttcttcccg
cccaacataagcaacagccgattcaatcagcccaccagcctgatgcaaatgcgtatacca
ccgccggcggccttcaatcagcgtatgggtggaccccctaacaatgctggcaatggcggt
gccgtgggaccaatgttcatgcgcaaccagggcggcaatggcggtggacctggcggacct
ggcggacctggtggacccggtggacgacaacagggacagggaccaggcttcttcaatccc
cggaatcccttcaatgataatcaacgcggacgcggaggccctggtgtgaatgcgaggaat
gcctcaaccggaggcggcgggcgaggacgctggagcgacgatgaggatgaagtcggcaac
aatttcaacaagcgtcgtgccggtcctggaggtcctggcggtaatcgcttccgtggagat
cgagagggcgagattcccgacgatcgccgtggcaacaacgcgcgtggcgggcgcggacca
agagaagaacgtgaccgtccaaggtttggaaatagacgcggctcgcgagatgacagtagt
cgacattcaatgagttccacggatgaaggaaacagcaaacccatgtcggaaacggattcc
agggaaaagaatcgggagacgccgctgtccagcactaattcgctatcagtgccaacacca
gcccaagcatcagctccagccccagcaactgctgagacggcggacaccgaggaggactgg
gaccgtgagctgcaggactatgaagggagaatggaggcagagcaagcagctaaggccgag
cgagatgtaccagaggttactccagttggtgcagagcaaagagcggcctctgggtcgccg
gtggataatttcgcaagaccagcggaagtggcgaacgattttccggcactaaaacaatca
gatgcttcacccgcctgcacgcccctctacgatgagctgccaccaccctcagccacaacc
ccagccctagctcccgctgagcccgaaagcagagtagaagtacctgcagaagcagaagcc
gaagcagctcctccacagaaacctgaatttattcgcacagaggctgtgcccaaagacgaa
tccccttcaactcctgctccagctctggaaatacaagatgaagctccaaaaatggatgct
acacagtcagaagctccattatcggaggagtcatccaatccagcggtgactgtcgaggct
gaagcataa
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