Drosophila miranda: 117192317
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Entry
117192317 CDS
T06132
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmn04131
]
117192317
Membrane trafficking [BR:
dmn04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117192317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_C
VPS13_M
Motif
Other DBs
NCBI-GeneID:
117192317
NCBI-ProteinID:
XP_033252861
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All DBs
Position
Y
Genome browser
AA seq
2844 aa
AA seq
DB search
MVFEAVVADVLNKVLGDYIENLDRNQLKIGIWGDDVVLQNLKIRDSALEDLDLPVQIVYG
YLGKLVLKIPWKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYELDAKMAALDALEA
ARKKEIEKNTAKPDAGVAEQLTAQIVNNLQVTISNVHLRYEDSTTTGSPFSFGVSLHSLE
LFTTDSNWDNTYMTEQASQVFKIANLSCLSAYMNCTARLFAKEATSLTELFQTSIARKDF
KPLHYNYVLGPISCNAKLKLNMNPELDSPAFQIPKIDLCLEMETLNVGLTNPQLDNIIKL
GDAMNRMQLGLPYRKYRPYNLPIKGHAKEWWQFAASSILEVQVRRPRRCWTWAHIKQHRD
RCNTYAQKYKERELSKKPPAILIETCSLLEQELDAFNLLLLEKLRDTAPVPKTGWLSGWW
GGGAKKENEGQDQNFVQKFEAAMTPEEKAKMYKAIGYEENAKPQDVPVNYEAIRMNFKLI
ALKVGLDQDKGSATDNRISYDYQDLPSLVLLKFSMATASVSQRPAADAITITAGMKELKV
SGLVRDGRTPMLVESKITDEFNLLDIFFETNPLDGLSDQRVKIVARPLQIIYDAETILNL
ISVFQPPKDMTLSRFENAASLQLNSIKERSATGMQYMIEMKSVLDADILLMPNVLVVPHK
GVYAADQSSLVVISMGQVHLTTNTRRRASTSVFGSSEERGEILKNVMENAYDRYIIKVDD
IQLLVARPGEPWDHVLKAAVSTDMHVLQPASLMITAALCVVDNDPRMPKMKVDIEIPTVQ
VNISEDRVIDAISVATSIPLPEASEPAAQLIMTRSRSSLSSFLNKDVIKFGGSNGGNTAT
SAVEEIIQYTNLEVNFSLKEISFGLYQSNRLCENDSDVTIEFLTPEGTAMPSPMDAPQPK
TTVEKPSLEAAFARRSPQILSVQVHQLEATLAQRTYETVATVKLGGVKIKQFDCQENNQE
VLDIIHTPGYNQGENLGQSVNYLFTVSYTMADKTSPEFSTKYNSTEQLIVANFEMLQIVL
HQECLLRVLELVTDFQKNLDNLLQTDKPRDRYALAGAGDGLKQKLNVILEDTEQIMVPKQ
TKIRCMKASQRRVESVKLRLIANLNQVGLMLTSRSRPLAEMNVKKCIRMGFNVRYPTIIA
TSSLFVGHNKKINLILHVDEPDIILVESLDDLNTNAIIFNAQAHLNYRAIDDKQIINGQI
DALKIYMSAFLPERREQTRHYILHPXVISLQGSTPEEQGLHISLKLSDIIINVSPATIEL
LNKAIMSIASGTAVKAVMENETKXHTQLWYPHNFRNRFYWFTRVDEGLDALQFINNELKE
SAKQKTEKCVIELPSITVVIESGVGYYTKPLISLDTRITAVFNNWSRNLSAHGSLTLNMN
YYNQCLAEWEPIIELNEVVGCNGVSEYTPWELKFDLATEKVQSETNDALEQQTINMVIHS
EENLEITFSKTSLSLLGELSEAFSQAIDQKSLAKPDVVAPYVVENDTGFDLTLNLGGGIF
TLHEVYRGGGHSVNSSLLMSSSELSSEVDPNDIQICTISAGGRAYLQTKDLSTLTDDQAE
DYNLYLTIGSIEKRVVVPVSKSDTRYFPLMRGISHDHWCIISEVKQDYGTTTVNTHGVVS
VFNHFTTTISVYRRKTTHKSDIFVGSAGPGKVFNVPLHAIYADSKDLFFSFPGYKTSVQG
ISWSASPSDLNYSHQLQCDPISTFEPLYINATRTKNEVYHEITNKFKLLSAFYTIHLRPP
LYLRNALPINIMVSVAGCSVRRDSLEVTRSSPDLAIKNIREDFLDYGEKQVSPGDVLHLP
TVRLSEKGKDGKSFLVVRLLQYLEKDWSCATEISECSGELCTWTFSSYDSEMKVDMELNV
RPEDRHGSMMLTLFSPFWMINKTGEMLTYKTEATSVEVLYHPPEYSGPILLTFRDNVFFD
KKKASIRCDNGDWSEKIPLDVAGSVGEVTCHANDRKYHIGVHNHLTQDSLTKQITFIPFY
IVCNRCPYKIEPQEQSRPGDPWMALQPNQFEPLWPKNDHKHNLMVRLEEKVTPAFDYTEV
ICTLLKLENSRHGGINVDVQTTEGGVYITFTEYQKCDAPGLLINHTRKEICYQKKNTKEG
KILYAKNNIMFAWSHPTGPKILVFGKNKQETDLRRDDIGEVVMQDGTKAFWVSFLDVLQR
VLLFTEVESIAKRTETTASLQTITQSIDLRIHSIGLSVINNQTGLDILYLGVTSSGIIWE
SKKEGKKRFKEMTIHDTDLLEAEYQQYLVHKSVNDVQNYKLDNKFPIDFDGMVLKKAVDR
QLRRSFYPAIWVSNKSSPFQNQLHIKINRVQVDNQFIDPIFPVVLAPIPPPKSVASTTTL
KPFIECSMVQRVMPNSTVKQFKYAKILIQEFHFKVDILFLTAIAEMFAKEVSDKVAAKQF
RQDVDSIEQPLSAFFELHSQQEQKNFYDSLHLGPLKIHVSFSMAGSDTTAMPGFLGTLVQ
GVGVTLTDVNDVVFRLAFFEREYQFFTQQQLINEITSHYTGQALKQRNVLVLGLDVLGNP
YGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHTVGGAAGAMSKITGAMG
KGLAALTFDEDYQKKRRQGMNNKPKNFHEGLARSSKGLVMGFVDGVTGVVTKPVSGARDH
GVEGFFKGLGKGAIGLIARPTAGVVDFASGSFEAVKRATEANEDVKRLRLTRFQHNDHVL
RPYCFSEAMGNKMLKELDKGKYASTDSFVHCEEIIQKAEYLLVTNYRLVYIQRNEMFGIW
TSLWSYLWNDINSVDATTLGVQITVKVESKKVLGFFSSKESPRRLVLLADDRKRRALKEI
IESHLGDSISNVTATSYYPGQKNN
NT seq
8535 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaggcagttgttgccgatgtcctcaacaaggtgctgggagactacatcgag
aacttggatcgtaaccagctcaaaataggcatttggggagacgatgtggttttgcaaaac
ctaaagatacgcgacagtgccctggaagatttggacctgccggttcagattgtctacgga
tatttgggtaaactggtactgaagataccatggaagaatctgtacagccagcccgtgatc
gtgaacattgaagatctctatgtcctggtctcgcccaataacaatgtccagtacaatgcg
gagaaggaggccaagtatgaactggatgccaagatggcggcgctagatgccctcgaggcg
gcccgcaaaaaggagattgagaaaaatacagccaagcccgatgctggagttgccgagcaa
ctaactgcgcagattgtgaacaatctgcaggtgacgataagcaatgtgcatttgcgatac
gaggacagcacaacgaccggcagtccgttctcctttggcgtatcgctgcacagtctggaa
ctcttcaccacggacagcaactgggacaatacctacatgacggagcaggcctcccaggtg
ttcaagatagcgaatctctcctgtctgtctgcctacatgaactgcaccgctcgtctcttt
gccaaggaggcgacatcgctcacagaactcttccagacgagcattgcccgcaaggacttc
aagcccctgcactacaactacgtgctggggcccatctcgtgcaatgccaagctgaagctg
aacatgaatcccgagctcgatagcccggccttccagatacccaaaatagatctctgcttg
gaaatggaaaccctgaatgtgggtctaaccaacccccagctcgacaatattatcaagctg
ggcgatgccatgaaccgcatgcagttgggcctgccctaccgcaaatatcgaccgtacaac
ctgcctatcaagggtcatgccaaggagtggtggcagtttgcagccagctccatactcgaa
gtgcaagtgcggagaccgcgacgctgctggacctgggcacacatcaagcagcatcgggac
cgctgcaatacttatgcacagaaatacaaggaacgagagctgagcaaaaagcccccagcc
atccttatagagacttgtagtctgctggaacaggaactggatgctttcaatctgctacta
ctagagaagctaagggacacagcgcctgtgccgaagacaggctggctgagtggctggtgg
ggcggcggagccaagaaggagaacgagggccaagatcagaattttgtacaaaaattcgag
gctgccatgacgccggaggagaaggccaagatgtacaaggcgattggttacgaggagaac
gcgaaacctcaggatgtgcccgtaaattatgaagcgatcagaatgaactttaagctgatt
gccttgaaggtgggtctggaccaggacaagggctcggccaccgacaatagaatttcgtac
gactaccaagatctgccgtcgctggtactgctcaagttctccatggccacggcctcggtg
agccagcgaccagctgctgacgccatcaccatcaccgctggcatgaaggaactcaaggtg
tcgggcctcgttcgcgacggccgtacacccatgctcgtggagtcgaagataaccgacgaa
tttaatctgctggacatattcttcgagacgaatccattggacggactcagcgatcagaga
gtgaagatcgtggcgcgtcctctacaaatcatatacgatgcagaaacaatcctgaacctc
ataagtgtgttccagccgcctaaggatatgacactctcaaggttcgagaacgctgccagc
ctgcagctgaacagcatcaaggagcgctcggccacgggcatgcagtatatgattgaaatg
aagtccgttcttgatgcggacatcctgctgatgcccaacgttctggtggtgccccataaa
ggcgtatatgctgcggaccagtcctcccttgtggtcatcagcatgggacaggtgcacttg
acgaccaacacccggcgccgtgcgtcgactagtgtgtttggctccagcgaggagcgaggc
gagattctcaagaacgtcatggagaacgcttacgacagatacatcattaaggtggacgac
attcagctactggtggcgcgccctggcgagccgtgggatcatgtcctcaaggcagccgtc
tccacggatatgcatgtgctccaacccgcctccctgatgatcactgccgccctctgcgtg
gtggacaatgacccccgaatgcccaagatgaaggtggacattgagattcccaccgtccaa
gtgaacatctccgaggatcgggtgattgatgccatctcagtggccacgagcatacccctg
ccagaagcgtccgagccagcggcgcagctgataatgacgcgctcccgcagctcgctctcc
agtttcctcaacaaggacgtgatcaagttcggcggcagtaatggagggaacaccgcaacc
tcggccgtggaggagatcatacagtacaccaatttggaggtgaacttctcactgaaggag
atctctttcggcctgtatcagtcaaacaggctgtgcgagaacgattcggatgtcaccatt
gagtttctgactccggaaggaactgcaatgccgtcccctatggatgcaccgcaaccgaaa
acaacggtggagaagccgagcctggaggcggcctttgcaaggcgttcaccccagattctg
tccgtccaggtgcaccagcttgaagcaacattggctcagcgaacctacgagacagttgcc
acagtcaagctggggggcgtgaagatcaaacagttcgactgtcaggagaacaaccaggag
gttctggacataattcacacgcccggatacaaccagggcgagaatctgggccagagcgtg
aactacctgttcaccgtctcgtatacgatggctgacaagacatcgccagagtttagcacc
aaatacaactccacggagcagctgatcgtcgccaacttcgagatgcttcagattgtgctg
catcaggagtgtctgctgcgagttctggagctggtgacggacttccagaaaaatctggac
aatttgctgcagaccgacaagccgcgcgatcgctatgccctcgctggagccggcgatggt
ctcaaacaaaagctcaatgtcatccttgaagacactgaacaaatcatggtccccaaacaa
accaaaataagatgtatgaaggcatcccagcggcgtgtggagagcgtgaagctgcgcttg
atcgccaacctcaatcaagtggggttgatgctaacctcgagaagccgcccgctggcggag
atgaacgtgaagaaatgtattcgaatggggttcaacgtccgatatccgacaataatcgct
acctcttcgctttttgttgggcacaacaagaagataaatcttatactgcatgtggatgag
ccggatataatcctcgtggaaagcctggacgatctgaacacaaatgccatcatcttcaat
gctcaagctcatctaaattatcgcgccatagatgacaaacagatcattaatggacaaatc
gatgcactcaagatttacatgagcgcctttctgccggagcggcgggagcagacgcgccac
tacattttgcacccgtgagtgatcagcctgcagggctccacgcccgaagagcagggcctg
catattagtctcaagctaagcgatatcataatcaacgtgtcccccgccacgatcgagctt
ctgaataaggcgataatgagcatagccagcggtactgctgtaaaggcagtcatggaaaac
gaaacgaagngacacacacagctctggtatccgcacaatttccgcaaccgattctattgg
ttcaccagggtggatgagggcctcgatgccctgcagtttattaacaacgaactgaaagaa
tccgcgaagcagaagacggagaagtgcgtcattgagctgcccagcatcacggttgtaatt
gagtcgggcgtgggatactacaccaagcccctcatatcgctggatacacgcatcacagcc
gtctttaacaattggagccgtaacctgagcgcacatggatcgctgaccctcaacatgaac
tactacaaccagtgcctcgctgagtgggagccaattatagagctaaacgaggtggtgggc
tgcaacggagtcagcgagtacacgccctgggagctgaagtttgacttggccacggagaag
gtgcagagcgagacgaacgatgcgttggagcagcaaaccatcaacatggtcatccattcg
gaggagaatctggagataacattcagcaaaacgagcttgtccctgctcggcgaactgagc
gaggccttctcgcaggccatcgaccagaagagtctcgccaaaccggatgtagtcgcgccc
tatgtcgtggaaaacgacacgggctttgacctcaccctcaatctgggcggcggcatcttc
accctgcacgaggtgtatcgcggaggcggtcattctgtcaacagttcattgctaatgtcc
tccagcgaactatcctccgaggtggatcccaatgacatacaaatttgcaccatttcagcc
ggtggacgagcctatctgcagaccaaggacctcagcacattaaccgatgatcaggccgag
gactacaatctctatttgacgattggttccatcgagaaaagagtcgtggtgcccgtgtca
aagtccgatacaagatacttccccctgatgcggggcatatcccatgatcactggtgcatc
atttccgaagtgaagcaggactatggcaccaccacagtgaacactcatggtgtcgtcagc
gtctttaaccactttactaccaccatcagcgtgtatcggcgcaagacgacgcacaaaagt
gatatttttgtgggcagtgctggacccgggaaagtgttcaatgtgccccttcacgccatt
tacgcggactccaaggatttgttcttctcctttccgggctacaagacctcggtgcagggt
atttcctggagcgccagtccctcggacctcaactactcgcatcagctgcagtgcgacccc
atctccacatttgaaccgctgtacataaacgccacgaggacaaagaatgaggtctatcac
gagattaccaacaaatttaagctattgagcgccttctacaccatccacttgcgcccgcct
ctgtacctacgcaatgccctccccatcaacataatggtttcggtggctgggtgctctgtg
cgaagggactcgctggaggtcacccgcagctcacctgatttggctataaagaacatcaga
gaggacttcctggattacggcgagaagcaagtgagtcccggcgacgttctgcatttgcct
actgtccgcctgtcggaaaagggaaaggacggcaaaagctttctggttgttcgactgcta
caatacctagagaaggactggtcctgtgccaccgaaatttccgagtgcagcggcgaactc
tgcacgtggacgttttcatcgtacgactctgagatgaaagtggatatggagctcaatgtg
cgaccagaggatcgacacggcagcatgatgctcacgttgttcagccccttctggatgatc
aacaaaacgggggagatgctcacctataaaacagaggccacatcggtggaggtgttatac
catccaccggagtatagtggacctatacttcttacctttcgtgataatgtgtttttcgac
aagaagaaagcttcgattcgctgcgacaatggggattggagcgagaagattcctcttgac
gtggccggttcggtgggcgaagtcacctgccatgccaacgatcgaaaatatcacatcggc
gttcacaatcacttgacccaggactcgttgaccaagcagatcaccttcataccattctat
atcgtctgcaacagatgcccctacaaaatcgagccccaggagcagagtcgtccgggcgat
ccgtggatggcccttcaacctaatcagtttgagcctttgtggccgaaaaacgaccacaag
cacaatctcatggttcggttggaagagaaggtgacgcctgccttcgactacaccgaggtg
atctgtaccctgctgaagctggagaacagcagacatggaggcatcaacgtggacgtgcag
acaacggagggcggtgtatacataacattcacagagtatcagaaatgcgatgcaccgggg
ctgctcatcaatcacaccagaaaggaaatctgctaccagaagaagaacaccaaagagggt
aaaattctgtatgccaaaaataatattatgttcgcgtggagtcatccgacgggtcccaag
attcttgtatttggcaaaaacaaacaggaaaccgacttgcgacgtgacgacattggtgag
gttgtcatgcaagacggcaccaaggccttctgggtctccttcttggacgtcttgcagcgt
gtgttgctgttcaccgaagtcgagtcgatagccaaacgtacagaaaccaccgcctccctg
cagacgattacgcagagcatcgatctgcgcatccatagcatcggtctgtctgtgataaac
aatcagacaggcctagatatactgtacctgggtgtcaccagctctggcatcatttgggag
tccaagaaggagggtaagaagcgttttaaggaaatgaccattcacgacaccgaccttctg
gaggccgagtaccagcagtatctggtgcacaaaagcgttaacgatgtccagaactacaag
ctagacaataaatttccaatcgacttcgacggaatggtgctaaagaaggccgttgatcga
cagctgagacgcagcttctacccggccatttgggtgtcgaacaagtcatcaccattccag
aatcagctgcatatcaaaatcaatcgtgtccaggtggacaaccagttcatcgatcccata
ttcccagtcgtgctagccccgataccgccgcccaagagcgtggccagcaccacgactctg
aaaccgtttattgagtgcagcatggtgcagcgcgtcatgcccaactcgacggtcaagcag
tttaagtacgccaagatactgattcaggagttccacttcaaggtggacatactgttccta
acggccattgctgagatgtttgctaaggaggtttccgataaggtggcggccaagcagttc
cgccaagatgtcgactccattgagcagcccctgtccgccttcttcgaacttcactcgcag
caggagcagaaaaacttctacgacagtctccacttggggccactcaagatacatgtcagt
ttctcgatggccggatcggacaccactgcaatgccaggcttcctgggcacactagtgcaa
ggcgtaggcgtgaccctaaccgatgtgaacgatgtcgttttccggctggctttcttcgag
cgcgaatatcagttcttcacgcagcagcaactaataaacgagattacctcgcactacacg
gggcaggcactgaagcagcgtaatgtcctcgtcctcggcctggatgtccttggcaatcca
tatggcttggtggtaggacttaaaaagggcgtagaggacttgttctatgagccattccag
ggggctatacaagggcctggcgaattcgctgagggtctcgtcctgggcgttaagtccctc
ttcggccacactgtaggcggggcagctggtgccatgtccaagattactggcgccatgggc
aaggggctggcagcacttacctttgacgaggactaccaaaagaaacggcgccagggcatg
aacaacaagccgaagaatttccacgaaggattagcgcgaagcagcaagggcttggtgatg
ggctttgtggacggggtgaccggtgttgtaactaaacctgtgagtggagctcgcgaccac
ggagttgagggtttcttcaaaggattgggcaagggagctattggtctgatcgcccgcccc
accgctggtgtggtcgactttgccagtggcagctttgaggcggttaaacgcgctacagag
gctaacgaggacgtcaagcggctgcgtctcactcgctttcaacacaatgatcatgtgctg
agaccctattgcttcagcgaggccatgggcaacaaaatgttgaaggaactcgacaaggga
aagtatgccagcaccgacagcttcgtgcattgcgaagagattatccagaaggccgagtat
cttctggtcaccaactaccgcctggtgtatatccagcgaaacgagatgttcggcatctgg
acgtcgctctggtcgtacctatggaatgacattaactccgtagatgctacgacgctcggt
gtacaaatcactgtcaaagtggagagcaagaaagtgctgggatttttcagctccaaggaa
tcgccccgcaggctggtgctgctggcagatgaccgcaagcgccgcgccctcaaggaaatt
atcgaatctcatttaggcgacagcatttccaacgtcacagccacatcctattatcctggt
caaaaaaataactaa
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integrated database retrieval system
