Drosophila miranda: 117192766
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Entry
117192766 CDS
T06132
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117192766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117192766
03041 Spliceosome [BR:
dmn03041
]
117192766
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117192766
Spliceosome [BR:
dmn03041
]
Complex B
Other components
Prp19-related factors
117192766
Complex C
117192766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_PRP39_C
TPR_14
Mad3_BUB1_I
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
ARM_TT21
Suf
Motif
Other DBs
NCBI-GeneID:
117192766
NCBI-ProteinID:
XP_033253401
LinkDB
All DBs
Position
Y
Genome browser
AA seq
272 aa
AA seq
DB search
MEEATEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWHKRVNLYEDKPTEII
NTYTEAVQTVQPKLAVGKLHTLWGEFAKFYESNGQVEDARVVFERGTEVEYVKVADLAAV
WCEWAKMELRQQQFEAALKLMQCATAMPKRKVAYHDDSETVQSRLHRSLKVWSMYADLEE
IFGTFKTCKAVYESIIDLKICTPQVIINYGMFLEEHNYFEEAYRAYEKDIALFKWPNVYD
IWNSYLSKFFARYGGTKLERTALRTVPGSVTR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggccaccgaggaggacgacatcgatgtggagctgcgcctgtcgcgcttcgaa
tacctcatggagaggcgtctgctgctgctgaacagtgtcctgctgcgccagaatccgcac
aacgttcacgagtggcacaagcgggtcaacctgtacgaggacaagcccacggagatcatc
aacacctacaccgaggccgtgcagacagtccagcccaagctggcggtgggaaagctgcac
accctctggggggagtttgccaagttctacgagtccaatggccaggtggaggacgcccgc
gtggtcttcgagcggggcaccgaggtggagtacgtcaaggtggcggatctggccgccgtg
tggtgcgagtgggcgaagatggagctgcgccagcagcagttcgaggcagccctcaagctg
atgcaatgtgccacggccatgcccaagcggaaggtggcgtatcacgacgactcggagaca
gtgcagtcgcgcctccacagatccctgaaggtgtggtccatgtacgccgatctggaggaa
atctttggcaccttcaagacctgcaaggccgtctacgagagcatcatcgacctgaagatc
tgcacgccgcaggtgatcatcaactatggcatgttcctcgaagagcacaactacttcgag
gaggcctatcgggcctacgagaaggacattgccctgtttaagtggccgaatgtgtacgac
atctggaactcgtatctaagcaagttcttcgcgcgctacgggggcacaaagctggagcga
acagctcttcgaacagtgcctggatcagtgacccgctga
DBGET
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