Entry |
|
Name |
(GenBank) uncharacterized protein, isoform A
|
KO |
K12830 | splicing factor 3B subunit 3 |
|
Organism |
dmo Drosophila mojavensis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:dmo00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmoj_GI12293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:dmo03021]
Dmoj_GI12293
03041 Spliceosome [BR:dmo03041]
Dmoj_GI12293
03036 Chromosome and associated proteins [BR:dmo03036]
Dmoj_GI12293
Transcription machinery [BR:dmo03021]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
Dmoj_GI12293
Spliceosome [BR:dmo03041]
Complex A
U2 snRNP components
U2 snRNP specific factors
Dmoj_GI12293
Complex B
Dmoj_GI12293
Complex C
U2 SnRNP specific factors
Dmoj_GI12293
Chromosome and associated proteins [BR:dmo03036]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
Dmoj_GI12293
TFTC complex
Dmoj_GI12293
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
AA seq |
1227 aa
MYLYNLTLQKGTGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDPNTGKVHTLMSTEIFG
CIRALMAFRLTGGTKDYIVVGSDSGRIVILEYMPSKNALEKVHQETFGKSGCRRIVPGQY
FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP
MFACLEIDYEEADLDPSGDAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFICSATHRTKSMYF
FLLQTEQGDIFKITLETDDDVVSEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRALKNLVLVDELPSFAPIITSQVADLANEDT
PQLYVLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLCCAALGDDALVQVYPDGIRHIRSDKRVNEWKAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDPTGELNEYTERSEMPAEIMCMALGTVPEGEQ
RSWFLAVGLADNTVRILSLDPNNCLSPCSMQALPSPAESLCLVEMGHTESTTNAGADDDV
PAQRSGSNKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEA
VLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGIVAISTNTLRILALEKLG
AVFNQVAFPLQFTPRAFVIHPDTGRMLIAETDHNAYTEETKNARKEQMAEEMRSAAGEEE
RELAREMANAFINEVLPEDVFSAPKAGLGLWASQIRCLDAMHGQTMFTVPLTQNEAIMSM
AMLKFSVAADGRYYLAVGIAKDLQLNPRISQGGCIDIYKIDPTCSALEFLHRTEIEEIPG
ALCGFQGRLLAGCGRMLRIYDLGKKKMLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF
FIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLSIQRLPHSVTDDVDEDP
TGTKSLWDRGLLSGASQKSENICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFV
PFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIDAVKQ
KSIAGDMFRTPNQICKKLEDIRTRYAF |
NT seq |
3684 nt +upstreamnt +downstreamnt
atgtacttgtataatttgacgctccaaaagggtaccggcgtcacgcatgccgtgcacgga
aatttttcaggcggtaaacagcaggaggtgctgctgtcacgtggcaagtcgctggaactg
ctgcgacccgatcctaacacgggcaaagttcacacgctgatgtcgacggaaatatttggt
tgcatacgtgcgctaatggccttccgtctaacaggcggcacaaaagattatattgtcgtg
ggatcagattctggacgcattgttattttggagtacatgcccagcaagaatgccttggaa
aaagtacatcaggagaccttcggcaaatcgggctgccgccgcattgtgccgggacagtac
tttgccattgatcccaagggccgtgccgtgatgattggtgctgttgagaaacaaaagctg
gcctacatcatgaaccgagatacccaggcacgactaaccatatcttcacctctggaggca
cacaagtccaacaccttgacctaccatatggtgggcgtggacgttggctttgataatccc
atgtttgcttgtctggaaatcgattacgaggaagctgacttggatccatcaggggatgca
gctcaacggacgcaacagacgctcacattttacgaacttgatttgggcctcaatcatgtt
gttcgcaagtactctgaaccactcgaagaacacgcaaacttcttggtttctgtgccaggt
ggcaatgacggaccctctggcgtgcttatttgctctgagaactatctgacctacaagaat
ttgggtgatcagcatgatatacgttgtcccatacctcgtagacgcaatgatcttgatgat
cctgagcggggaatgatctttatatgctccgcaactcatcgtaccaagagcatgtacttc
tttctgctacaaacagagcagggcgatatattcaagataacccttgagaccgacgacgat
gtggtttccgaaatcaagctaaagtactttgatacagtgccccctgcgacagcgatgtgt
gtgctgaagactggctttctgtttgtggccagtgaatttggcaaccattacttgtaccaa
atagcacatctgggcgatgatgatgatgaacccgaattcagttctgctatgccactggaa
gagggtgaaacgttcttcttcgctccacgtgcattaaagaatctcgttctggtcgatgag
ttgccttcctttgcacctattatcacctcccaagtggctgatttggccaatgaggatacg
ccacagttgtatgtgctgtgtgggcgtggaccgcgctccacactccgtgtactgcggcat
ggtcttgaagtatcagagatggctgtctccgagttgcccggtaatccaaatgccgtgtgg
actgtcaagaaacgcattgacgacgagtttgatgcctatatcattgtctccttcgtgaat
gctacactggttctgagcattggcgaaaccgtcgaggaagtgacggacagtggttttcta
ggcactacgccaacattgtgctgtgctgcactgggagacgatgctctggtccaagtctat
ccagatggcattcgtcatatacgctccgataagcgagtgaatgagtggaaggcgcctggc
aagaagtccatcacaaaatgcgctgtcaatcaacggcaggttgtcattacgctctctggt
cgcgagttggtttacttcgaaatggatccgactggtgagctgaacgagtatacggaacgg
tcggaaatgcctgcagagatcatgtgcatggctctgggcacggtgccagagggagagcag
cgatcttggttcttagcagttggtctggctgataacacagtgcgcatactttctctggat
cccaataattgcctctctccgtgctctatgcaggcgctaccctcgccggccgagtcgttg
tgtttggtcgaaatgggtcatacggagagtaccacaaatgccggtgcagacgatgatgtg
ccggcacaacgcagcggcagcaataagggcaccatatatttgaatattggattaagtaac
ggtgtgctactgcgcactgtgttggatcctgtatctggcgatttggcggatacccgaaca
cgctatttgggttcgcgtccggtgaaactgttccggatcaagatgcaaggcgctgaagcc
gtgttggccatgtctagccgcacctggttgtcctactatcaccagaatcgtttccatttg
acacccctgtcgtatgagacgctagaatatgcttcaggcttctctagcgaacagtgtagt
gagggcattgtggctatatcgactaacacactgcgtatcctcgctttggagaaactgggc
gccgttttcaatcaagtggcctttccattgcaattcacgccgcgagcctttgtcatacat
ccggatacgggtcgcatgttgattgctgaaacggatcataatgcgtacaccgaggaaacg
aagaatgcgcgtaaggagcaaatggctgaggaaatgcgtagcgctgctggcgaagaggag
cgcgaactggccagagaaatggccaatgccttcatcaatgaggtgctgcccgaggatgtg
ttctctgcacccaaggcaggactcggcttatgggcttcgcaaatacgctgcctagatgcc
atgcacggccaaacgatgttcactgtgccactgacacagaacgaggctatcatgtctatg
gccatgcttaagttctctgttgctgctgatggtcgctattatttggcagtgggcattgcc
aaggatctgcagctgaatccgcggatctcgcaaggtggatgcatcgatatctacaaaatt
gatccaacctgctcagcactggaatttctacatcgtactgagatcgaggagatacccggc
gcattgtgtggtttccagggtcgcctactagcaggctgtggtcgcatgctgcgcatctat
gatctgggcaagaagaagatgctgcgcaagtgcgagaataaacacattccctaccagatt
gtcaacattcaagcgatgggccaccgtgtctatgtctctgatgttcaggagtctgtattc
ttcatacgctatcggcgcgctgagaatcagctcatcatattcgctgatgatacccatccg
cgttgggtgacggctacaactctgttggattatgataccattgctattgctgataagttt
ggcaatctgagcattcaacgcctgccgcattcagtcaccgatgatgtggacgaagatccc
actggcacgaagtcgctctgggatcgtggattgctgtcgggtgcctcgcaaaagtcagag
aacatttgctcgttccatgtgggagagattatcatgtcgctacagaaggccactctcatt
cccggaggttccgaagcgctcatctatgccacattgagcggcaccgtgggcgctttcgtg
ccgttcactagtcgtgaggactacgacttcttccagcacttggagatgcacatgcgcaac
gaaaacccgcccttatgtggtcgagatcatctcagctaccgcagctcatactatcctgtg
aaaaacgtgctggacggtgatctctgcgaacagtatttatctattgatgcagtaaagcag
aagagtatcgcgggtgacatgttccgcacgcccaatcaaatctgcaagaagctcgaggac
atacgcacacgctatgcgttctaa |