Drosophila mojavensis: Dmoj_GI15538
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Entry
Dmoj_GI15538 CDS
T01062
Name
(GenBank) uncharacterized protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dmo
Drosophila mojavensis
Pathway
dmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmoj_GI15538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmo03041
]
Dmoj_GI15538
Enzymes [BR:
dmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Dmoj_GI15538
Spliceosome [BR:
dmo03041
]
Complex C
Other components
Step II factors
Dmoj_GI15538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Microtub_bd
T2SSE
Flavi_DEAD
AAA_30
AAA_16
cobW
ABC_tran
ATPase
PhoH
SRP54
Sigma54_activat
AAA_7
AAA_23
AAA_25
Motif
Other DBs
NCBI-ProteinID:
EDW07085
UniProt:
B4L3F7
LinkDB
All DBs
AA seq
1138 aa
AA seq
DB search
MSEDDAGVHRLEGTSGQEQRGGLVLKKPKDSDNKSPSFKVPKGSVLGLDKLAAKRRAEKA
RLISFQDNEYDDGGTPSSSANASTPVSEFAFKKPDTKSFEKLSRQLREHKDETPSYTGGV
SEKARERLREHIQRDRDRHKGAVRKSTRDDSDGKRDRDRVRDRDRDIERERDRQRRGDER
RKRAREQDQELYKDGRRRDRDRDRDRDRNRDRSASVRSVNTPREPGTPGGGISGSSWDDD
DGETSGGRKSDWDFPTPRGAGSGGSSSFGDWSERGSSRSRYADDTTRATPAHRYNQWAHD
RKRSGATPWAEDAELRDMWEEEQRRLDREWYNIDEGYDDENNPFGGSNADYFRRREEQLE
QKRKKRISAQQRQNNRDNELWERNRMLTSGVVTSINVSDDFDEEALERVHLLVHHIVPPF
LDGRIVFTKQPEPVVPVKDPTSDMALLARKGSLLVRNYREQKERRKAQKKHWELGGTKLG
NIMGVQRPQDEDDAKFDRDNDTADYRKDQKFADHMRDMQDNKGKSDFSRKKTIGEQRRFL
PVFASRQELLNVIRENSVVIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMS
VAKRVSDEMGTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPDLDSYSAIIMD
EAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSTKFATFFGNVPTFTIPGRTFPVD
VMFSKNACEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLSEIDNAPE
LSILPIYSQLPSDLQAKIFQKSADGVRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYN
PRIGMDALQIYPISQANANQRSGRAGRTGPGQAFRLYTQRQYKDELLPLTVPEIQRTNLA
NTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLD
PPQCQMLIVACQMEMNVKSCGTDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLH
PTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKETGRSGRDKK
KLAAEHLKEMEEQMLQAQHEMEERKQLAAQREEQLAGKQEIATPGNATPRRTPARIGL
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggatgatgcaggcgtgcatcgcttggagggcacttcaggccaggagcagcgt
ggcggcctggtgctgaaaaagcccaaagacagcgacaataagagccctagctttaaggtg
ccgaaaggttcggttctgggcctagacaagctagcggccaagcgacgtgctgaaaaagca
cgcctgatctcctttcaggacaatgagtacgatgacggcggcacaccttctagctcagcc
aacgcctctacgcctgtcagcgaatttgcctttaagaaacccgacacaaagagcttcgag
aagcttagccggcagctacgtgaacacaaagacgagacgccatcatacacgggcggcgtc
tctgagaaggctagagagcggctgcgcgagcacatccagagagatcgggatcgccataaa
ggcgccgttcgtaaatcgacgcgtgatgactcagatggcaaacgggatcgcgacagggtg
agagacagagacagagatatagagcgtgagcgggacagacagcgtcgcggcgatgagagg
cgcaagcgagcacgagaacaggaccaggagctatacaaagatggtagacgaagagacagg
gaccgggatcgagatcgagatcgcaaccgagatcgctcggcgtcggtgcgcagcgtgaac
acacccagagagccgggtacaccaggtggcggtatctccggcagctcctgggatgatgac
gatggcgagaccagcggtggacgcaaatcagactgggacttccccacaccacgcggcgct
ggctccggtggtagctccagttttggcgattggtccgagcgaggcagcagtcgcagccgg
tatgccgatgacacgacccgtgccacgcccgcacatcgttacaatcagtgggcgcacgat
cgcaagcgaagcggcgcaacaccctgggccgaagatgctgagctgcgtgatatgtgggaa
gaggagcagcgacgcctggaccgtgaatggtataacatagacgagggctacgacgacgag
aacaatccgttcggcggcagcaatgccgattactttcgccgtcgcgaagagcagctggag
cagaagcgcaagaagcgcatcagcgcccagcagcggcagaacaatcgcgacaacgagctg
tgggagcgtaatcgcatgttgacctccggcgttgtcacctccatcaatgtgagcgatgac
ttcgacgaggaggcgctggagcgagtccatttgctggttcatcatatagtgccaccgttt
ctggacggccgcatcgtgttcaccaagcagccggagccggtggtgcccgtcaaggatccc
acctcggacatggccctgctggcgcgcaagggcagcctcctggtgcgcaactatcgggag
caaaaggagcgccgcaaggcgcagaagaaacattgggagctgggcggcaccaagctgggc
aacattatgggcgtgcagcggccgcaggacgaggacgatgccaaattcgatagggacaac
gacacggccgattatcgcaaggatcagaagttcgccgatcacatgcgcgacatgcaggac
aacaagggcaaaagcgacttctcgcgcaagaagacaatcggcgaacagcgtcgcttcctg
cccgtcttcgcctcacgccaggagctgctcaatgtcatacgcgagaactcggtggtcatc
attgtgggtgaaacaggcagcggcaagaccacacagctcacccagtatctgcacgaggat
ggctacagcaaacgcggcatgatcggttgcacccagccgcgtcgtgttgccgccatgtcg
gtggccaaacgcgtctccgacgagatgggcacccaactgggcgaggatgtcggctatgct
atacgcttcgaggactgcacgtccgagcgtaccgttatcaagtacatgaccgatggcatc
ttgttgcgcgagagcctgcgcgatccggacctggacagctattcggccatcattatggac
gaggctcacgagcgttcgctctcaacggacgtgctcttcggattgctgcgtgagattgtg
gcacggcgtcatgacctgaagctgattgtcacatccgccaccatggactcgaccaagttt
gccacgttcttcggcaatgtgccgacattcaccatacccggccggacatttccggtggat
gtgatgttcagcaagaatgcgtgcgaggattacgtggagtcggctgtgaagcaggcgctg
caggtgcacttgacgccgaatgaaggcgacatgctgatctttatgcccggccaggaggac
atcgaggtcacgtgcgaggtgctggaggagcgcctgagcgagatcgacaatgcacccgag
ctgagcatcttgcccatctactcgcagctgccgtccgatctgcaggcgaagatctttcaa
aagtccgccgatggcgtacgcaaatgcgttgtggccaccaatatagcggagacatcgctg
acggtggacggcatcatctatgtcattgactccggctactgcaagctgaaggtctacaat
ccgcgcattggcatggacgccctgcaaatctatcccatttcgcaggcgaatgccaatcag
cgttcgggtcgtgccggacgtacaggtcctggtcaggcttttcgcttgtacacacagcgc
cagtacaaggacgaactgctgccgctgaccgtgcccgaaatccagcgcaccaatctggcc
aatacggtgctgctgctcaagtccctgggcgtggtcgatctgctgcagttccatttcatg
gatcccccgccgcaggacaacatcctgaactccctttaccagctgtggatattgggcgca
ctggatcacacaggcgccttgaccacgctgggccgacaaatggccgagttcccactggat
ccgccacagtgtcagatgctcatcgtcgcctgccaaatggagatgaacgtcaagtcgtgc
ggcaccgattgggacattgtgcgcaagtgcatctgctccgcctacttctatcaagcggca
cggctcaagggcatcggcgagtatgtgaatctgcgcacgggcatgccctgccatttgcat
cccacatcggcactgtacgggctgggcaccacgcccgactatgtcgtctaccatgagctg
atcatgaccgccaaggagtatatgcagtgtgccaccgctgtcgatggctactggctggcg
gagctcggtccgatgttcttctcggtgaaggagacgggacgcagcggacgcgacaaaaag
aaactggccgccgagcatctcaaggagatggaggagcaaatgttgcaggcccagcacgag
atggaggagcgcaaacagctggccgcccagcgtgaggagcagctggcgggcaagcaggag
atcgcaacgccaggcaatgcaacgccacgccgcacacccgctcgcattggcctctaa
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integrated database retrieval system
