KEGG   Drosophila mojavensis: Dmoj_GI16571
Entry
Dmoj_GI16571      CDS       T01062                                 
Name
(GenBank) uncharacterized protein
  KO
K10755  replication factor C subunit 2/4
Organism
dmo  Drosophila mojavensis
Pathway
dmo03030  DNA replication
dmo03410  Base excision repair
dmo03420  Nucleotide excision repair
dmo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dmoj_GI16571
   03410 Base excision repair
    Dmoj_GI16571
   03420 Nucleotide excision repair
    Dmoj_GI16571
   03430 Mismatch repair
    Dmoj_GI16571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dmo03032]
    Dmoj_GI16571
   03036 Chromosome and associated proteins [BR:dmo03036]
    Dmoj_GI16571
   03400 DNA repair and recombination proteins [BR:dmo03400]
    Dmoj_GI16571
DNA replication proteins [BR:dmo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Dmoj_GI16571
  DNA Replication Termination Factors
   ELG1-RFC complex
    Dmoj_GI16571
Chromosome and associated proteins [BR:dmo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Dmoj_GI16571
DNA repair and recombination proteins [BR:dmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Dmoj_GI16571
  Check point factors
   HRAD17(Rad24)-RFC complex
    Dmoj_GI16571
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 RCF1-5-like_lid AAA_16 Rad17 AAA_18 Viral_helicase1 Mg_chelatase nSTAND3 AAA_19 AAA_24 AAA_assoc_2 AAA_11 MeaB AAA_23 ABC_tran DNAX_ATPase_lid AAA_5 MnmE_helical RuvB_N NTPase_1 RNA_helicase DEAD AAA_28 AAA_2 AAA_7 AAA_29 AAA_30 SRP54 MCM AMP-binding_C_3 AAA_3 KTI12 IstB_IS21 bpMoxR FtsK_SpoIIIE AAA_33 ATP_bind_1 SRPRB AAA_25 CbiA
Other DBs
NCBI-ProteinID: EDW17314
UniProt: B4L9D9
LinkDB
AA seq 331 aa
MPEETGIVVVDKRNNLPWIEKYRPVKFDEIVGNEDTVARLSVFSTQGNSPNIIIAGPPGV
GKTTTIQCLARILLGDSYKDAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVIL
DEADSMTEGAQQSLRRTMEIYSNTTRFALACNTSEKIIEPIQSRCAMLRFSKLSDAQVLA
KLIEVCQLEQLKYDEDGLEAIVFTAQGDMRQALNNLQSTAQGFGEITGANVFKVCDEPHP
MLLQDMLQHCASNDIHKAYKILAKLWRLGYAPEDIIGNIFRVCKRLNVDEQLKLNFIREI
GITHMKIVDGCNSLLQLTSLLARLCMTAESH
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccagaggaaacaggaattgtggttgtagacaagcgcaataatttgccttggattgaa
aagtatcggcctgttaagttcgatgaaattgtaggcaatgaagatacagtcgcccgccta
tccgtcttctccactcaaggcaattcgccaaacataataattgcgggaccacctggagtg
ggaaagacaacaactatacagtgcctggcacgtattttgttgggcgacagctacaaggat
gcggtgctcgagttgaatgcatcaaacgaacgtggaatcgatgtagtacgaaataaaatc
aagatgtttgcccaacagaaggtcaccctgccacgcggccggcataagatagtaatcctg
gacgaggcggacagcatgacggagggtgcacagcaatcgctgcgacgcaccatggaaatc
tatagtaatacaacgcgtttcgcactcgcctgtaatacgagtgagaaaatcattgagccg
attcaatcgcggtgcgccatgctgcggtttagcaaactatcggatgcccaggtgctagcc
aagctaattgaggtgtgtcagctagagcagctcaagtacgatgaggatggattggaggcg
attgtgtttacggcgcagggcgatatgcgacaagctcttaataatttgcaatccacggct
caaggattcggtgaaattacgggcgccaatgttttcaaagtttgtgatgagccgcatccg
atgctgttgcaggatatgttgcaacattgtgccagcaatgatatacacaaggcgtacaag
atcttggcgaaattgtggcgccttggctatgcaccggaggatattattggtaatatattt
cgcgtctgcaagaggttgaatgtggacgaacagctgaagttgaacttcataagagaaatt
ggcattacgcacatgaagattgtcgatggttgtaattcgctgctgcagttgactagccta
ttggcgcgtttgtgcatgaccgccgagtcgcattag

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