Drosophila mojavensis: Dmoj_GI17233
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Entry
Dmoj_GI17233 CDS
T01062
Name
(GenBank) uncharacterized protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dmo
Drosophila mojavensis
Pathway
dmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmoj_GI17233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmo03041
]
Dmoj_GI17233
Enzymes [BR:
dmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Dmoj_GI17233
Spliceosome [BR:
dmo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
Dmoj_GI17233
Complex C
U4/U6.U5 tri-SnRNP related factors
Dmoj_GI17233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
Cas3-like_C_2
SRP54
TsaE
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
EDW11612
UniProt:
B4KKG2
LinkDB
All DBs
AA seq
893 aa
AA seq
DB search
MSSKNRKRTASSSSSAEEPDSEEESRIKDLRERDEFANRLKQRDEERTRKVVEATGGRKA
IEEATKRLKLEHEDRDKIVPHLRVQSRRQYLEKRKDDKVAELEADILDDEYLFEESVLTK
REREERQYKKQLLNIAKEHEKARELERIQRYHMPQDLKKGERSEYVEVDDFEKQPNSEQK
KWEAEQLASARFQFGAKDAKAEEEYELLLDDQIDFIQALTLDGSREKAAKETELTEKERK
RMTLEETRRSLPVYPFKEDLIAAVREHQVLIIEGETGSGKTTQVPQYLVEAGFTADKKMI
GCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSE
PDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAP
IFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVL
QDRVKRLGSKIRELIVVPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIY
VIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELE
ENTVPEICRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGEL
TKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTAR
KNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEID
MVSCLPETINVRKAATAGYFYHVARLSKGGNYKTIKHNQTVMIHPNSSLFEELPRWVLYH
ELVFTSKEFMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKGAGRAEMTQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaaaatcgtaaacgcacagccagcagtagcagcagtgccgaagaacccgac
agcgaggaggagtcccgtattaaggatttgcgtgaacgtgatgagtttgccaatcgctta
aagcaacgcgatgaggagcgaacccgcaaagtggtcgaagctacaggcggacgcaaggca
attgaagaagctaccaagcggctgaaactagagcatgaggatcgagataagattgtgcca
catctgcgtgtgcagtcacgtcgacagtacttggagaagcgcaaggatgacaaagttgcc
gagctagaagcagatatactcgacgacgagtacctctttgaggagagcgtgctaaccaag
cgggaacgggaggaacgtcagtacaagaaacagctgttgaatatagctaaagagcatgaa
aaggcacgtgaactggagcgcattcagcgctatcacatgccccaggatcttaagaaaggc
gagcgatcggagtacgtggaggtggatgactttgagaagcagcccaattcggagcaaaag
aaatgggaggctgaacaattggcctcggcgcgttttcagtttggtgccaaagatgccaag
gctgaggaggaatatgagctgttgcttgacgatcagattgatttcattcaggccctaacg
cttgatggtagtcgcgaaaaggctgccaaggaaacggagctaacagaaaaggaacgcaaa
cgcatgactttggaagaaacacgcagatcgttgccggtttatccctttaaggaggatctc
atagcagctgtaagagagcatcaggtgctgatcattgagggcgagactggttctggtaag
accactcaagtaccgcaataccttgttgaggcaggtttcacggcggataagaagatgatt
ggatgtacgcagccgcgtcgtgtggctgccatgtccgtggcggctcgagtagctgaagaa
atgggcgttaagctgggcaacgaggtgggctacagcatccgtttcgaggactgcacttca
gaccgcaccatactcaagtacatgacagatggcacactgcatcgagagttcctctctgaa
ccagatctggcctcttacagcgtcatgattattgatgaggcgcacgagcgcactttgcat
acggacattctgtttggacttgtcaaggatatagcacggttccgaccggagcttaagcta
ctgatatccagcgctacgcttgatgccgagaagttctctgccttcttcgatgatgctccc
attttccgcatacccggcagacggtatccggtggacatattctatacgaaagcacccgag
gctgattatattgatgcctgctgtgtgtccgtgctgcagattcatgctacgcagccactt
ggcgacatcttggtatttctcactggccaggacgagatcgagacgtgtcaggaggtgttg
caggatcgtgtcaagcgcttgggctccaagattcgcgagctcattgttgttccagtctat
gccaatctgccaagcgacatgcaggccaaaatctttgagccaacgccgccgaatgcacgc
aaagtgatccttgctacgaacattgcggaaacatcattgaccatagacaatatcatctat
gtcattgatccgggtttcgctaagcaaaacaatttcaattcacgaacaggcatggaatca
ttgatggtggtgcccatctcgaaggcttcggctaaccaacgagcgggacgagctggccgt
acggcacccggtaaatgttttcgcctgtacaccgcctgggcatacaagcacgagctggag
gagaatacagtgccggaaatttgtcgaatcaatctgggcaatgcggtgctcatgctcaaa
gccttgggcattaatgatctgatacactttgatttcctcgatccgccgccccacgaaacg
ttagtgttggcactggaacagctatatgcattgggtgcactcaatcatcatggtgaatta
accaaactgggcagacgcatggcagaatttcctgttgatcctatgatgggcaaaatgctg
ttagccagcgaaaagtataagtgctctgaggagatggtcaccatagcggccatgctgtca
gttaatagcgccatattctaccggcccaaggataagatcatacacgctgatactgcgcga
aagaatttcaatcatatgcatggcgatcatctgagcttgctgcaggtctataatcaatgg
gcggagacggattatagtacgcaatggtgctacgagaactttatacagtatcgctccatg
aaacgggcacgagatgtgcgcgaacaattggttggtctaatgcagcgagtggaaatcgat
atggttagctgtctgccggagacaattaacgtgaggaaggcagcgacggcaggctacttc
tatcacgtggcacgtttgtcgaagggcggaaattacaaaacaattaagcacaatcaaacg
gttatgatacatcccaattcttcgttgtttgaggagctgccacgatgggtgctctatcat
gagctagtattcacctccaaggagttcatgcgtcaggttattgagattgaaagcaaatgg
ctcctggaggtagcaccccattattacaaggcaaaggagctggaggattcgactaacaaa
aaaatgcctaaaggagccggacgtgcggagatgacgcaataa
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integrated database retrieval system
