Drosophila mojavensis: Dmoj_GI18628
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Entry
Dmoj_GI18628 CDS
T01062
Name
(GenBank) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dmo
Drosophila mojavensis
Pathway
dmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmoj_GI18628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmo03019
]
Dmoj_GI18628
03041 Spliceosome [BR:
dmo03041
]
Dmoj_GI18628
Messenger RNA biogenesis [BR:
dmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Dmoj_GI18628
Spliceosome [BR:
dmo03041
]
Complex B
Other components
Prp19-related factors
Dmoj_GI18628
Complex C
Dmoj_GI18628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_15
TPR_12
Mad3_BUB1_I
TPR_8
RPN7
PPR
ARM_TT21_C
ARM_TT21
TPR_10
Motif
Other DBs
NCBI-ProteinID:
EDW10263
UniProt:
B4KQC3
LinkDB
All DBs
AA seq
883 aa
AA seq
DB search
MSEKSTQPLQVELNFEEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNLVYERALK
ELPGSYKIWYNYLRTRRKQVRGRIPTDPMYEQVNNTFERALVFMHKMPRIWMDYGVFMSS
QCKITRTRHVFDRALRALPITQHGRIWPLYLKFVQRYEIPETALRVYRRYLKLFPEDAEE
YVAYLQEAQRLDEAAQQLAHIVDNEHFVSKHGKSNHQLWNELCDLISKHPHKVHSLNVDA
IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EELSLNKRMEQVANDEDASEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVKLYEDKPEEIINTYTEAVQTVQPKLAVGQLHTLWVEFAKFYEENGQVDDARVVFERG
TQVEYVKVEHLAAVWCEWAEMELRQQQFEAALKLMQRATAMPKRKVAYHDETETVQMRLY
KSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQIIINYGLFLEEHNYYEEAYRAY
EKGIALFKWPNVYDIWNSYLTKFLKRYGGTKLERARDLFEQCLDNCPPEHAKYFYLLYAK
LEEEHGLARHAMAVYDRATSAVKEDEMFDMYNIFIKKAAEIYGLPRTREIYEKAIEALPE
QNMRHMCVKFAELETKLGEVDRARAIYSHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLNTNSGAAADAGAGSGSDAMRMLEEKARQAAAEAKQ
KPSQTTSSNIMFVRGETQGGSKTKDNTVVNPDEIDIGDSDEEDDDEDEAEDAADHAPEGD
SAAATKTDAEGLIMKKLRFEQKAIPAKVFGGLKPSTQQDSDEE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaatcaacacagccgctgcaagtcgagctgaattttgaagaggaggatgtg
ccgtacgaggaagagattctacgcaatgcgtattccgtgaagcactggctccgctacatc
gaccataaggctaaggctcccaacaatggcgttaacttagtgtacgagcgcgccttgaag
gagctgccgggcagttacaagatctggtataactacttgcgtacgcgtaggaagcaggtg
cggggccgcattcccacagatcccatgtacgagcaggtgaacaacacgtttgagcgtgcg
ctggtcttcatgcacaagatgccgcgcatttggatggactatggcgtgttcatgagctcg
cagtgtaaaatcacacgcacccgccacgttttcgatcgtgcgctgcgtgccttgcccatc
acgcagcatggacgcatctggccgctgtatctgaagtttgtgcagcgttacgagataccc
gagacggcgctgcgtgtctacaggaggtatttaaaattgtttcccgaggatgcagaggag
tatgtagcctacttacaggaggcacaacgtctggacgaggcggcacagcaactggcgcac
attgtggacaacgagcattttgtgtcgaagcacggcaagtcaaatcaccagctatggaac
gagctctgcgacttgatctcgaagcatccgcacaaggtgcattcactcaatgttgatgca
attattcgtggtggtctgcgtcgctacacggatcagttggggcacctctggaactctctg
gctgactattatgtacgctcaggcctgtttgatcgtgctcgtgatatctacgaggaggcc
atacagacggtgaccacagttcgggacttcactcaagtcttcgacgagtatgcgcagttt
gaggagttgtcgttgaacaagcgcatggagcaggttgcaaacgatgaagacgccagcgag
gaggacgacattgacgtcgagttgcgtctctcgcgcttcgagtatttgatggaacgtcgt
ctgctgctgctgaacagcgtgttgctacgccagaatcctcacaatgtgcatgagtggcac
aagcgggtgaaactgtatgaggacaagcctgaggagattatcaacacctatacggaggcc
gtgcagacggtgcagccgaagctggcagtggggcagctgcacacgctgtgggtggagttc
gccaagttctacgaggaaaatgggcaggtggacgatgcgcgcgtggtatttgagcgcggc
acgcaagtggagtacgttaaggtggagcatttggcggcagtgtggtgcgagtgggctgaa
atggaactgcgccagcagcaattcgaggctgcgctcaagctaatgcaacgtgccacggca
atgccaaagcgaaaggttgcctaccatgacgagacggagacggtgcaaatgcgtctatat
aaatccctgaaggtgtggtccatgtacgccgatctggaggaatcttttggcactttcaaa
acctgcaaggctgtgtacgagcgcatcattgacctgaagatttgcacgccacaaataatc
attaattacggcctgtttctggaagagcacaactactatgaggaagcctatcgcgcatac
gagaagggcattgcgctattcaagtggccgaatgtctacgatatatggaattcgtatttg
acgaagttcctgaagcgctatggtggcaccaaactggagcgtgctcgcgatcttttcgag
caatgcctggataattgtccgccggagcatgccaagtacttctacttgctctatgccaag
ctggaggaggagcacggcctagcccgacatgccatggccgtgtacgaccgagcgaccagc
gccgtcaaagaggacgagatgttcgatatgtacaacatatttattaagaaggcagccgaa
atttacggactgccacgcacacgcgagatctatgagaaggccattgaggcgctgccggaa
cagaacatgcggcacatgtgcgtcaagttcgccgagctggagacaaagctgggcgaggtg
gatcgcgccagagccatctattcgcattgctcacaggtctgcgatcctcgcattacagcc
gatttctggcagacctggaaggagttcgaggtgcgtcatggcaacgaggacacaatgcgt
gagatgttgcgcatcaagcgctcggtgcaggccacctacaacacccaggtcaacatgatg
gcagctcagttcctcaatacgaatagtggcgctgcagccgatgcgggcgctggctctggc
tcggatgccatgcgcatgctggaggagaaggcgcgacaagcggccgccgaggccaagcag
aagcccagccaaacgacttcttccaatattatgttcgtgcgtggcgaaacgcaaggcggc
tccaagaccaaggacaatacggtcgtcaatcctgatgagattgatatcggcgacagcgac
gaggaagatgacgatgaagatgaggcagaagacgctgcagatcacgcgccagagggcgac
tcagctgcagctacgaaaactgatgcagagggtctcatcatgaagaagttgcgcttcgaa
caaaaggcaatacccgccaaggtcttcggtggcctaaaacccagcactcagcaagactcc
gatgaggaataa
DBGET
integrated database retrieval system