KEGG   Drosophila mojavensis: Dmoj_GI19621
Entry
Dmoj_GI19621      CDS       T01062                                 
Name
(GenBank) uncharacterized protein
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dmo  Drosophila mojavensis
Pathway
dmo03440  Homologous recombination
dmo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Dmoj_GI19621
   03450 Non-homologous end-joining
    Dmoj_GI19621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dmo03032]
    Dmoj_GI19621
   03400 DNA repair and recombination proteins [BR:dmo03400]
    Dmoj_GI19621
DNA replication proteins [BR:dmo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    Dmoj_GI19621
DNA repair and recombination proteins [BR:dmo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     Dmoj_GI19621
    BRCA1-C complex
     Dmoj_GI19621
   NHEJ (non-homologous end-joining)
    MRX complex
     Dmoj_GI19621
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SbcC_Walker_B AAA_29 AAA_21 ABC_tran AAA_16 TPR_MLP1_2 YdjO DUF7532 AAA_13 AAA_22
Other DBs
NCBI-ProteinID: EDW08362
UniProt: B4KS80
LinkDB
AA seq 1312 aa
MSTIEKLSIQGVRSFGVNAEDMQSITFSSPITLILGQNGCGKTTIIECLKYALTGEYPPG
SSSGKNFVHDPNIFDKNESLAQVKMLVCDRRNVQMSICRSMKVTKVRAGLTFKTIDSTIN
FLGGDGKPSKNSQESMSSRVINTDMAISDFMGVSKAIINSVLFCHQEDSSWPLDEPKKLK
EKFDAIFGITEYNKALDRIIKLRKTAVEELKVMNANLKLLEHFKKEMDEKTMNLQNAQRK
CEEIKEECIKCDEEVKPIDARLKEIRNIEYEIGEYQAEKVKVDTKHQSCVEQIAKLNRQI
KTPFEGSLVELEAEIRSFSQRMSEIKYQLTDVEEQLLQKRKSKEEQQKTLAKQDRERYVA
QQKLKSEQECKLELSRHIQTLSAQLQLNVEASVVDNPQKLIDLLDDIDGNLMAKQCEITE
LSQSNDQADQARQEKIDELRNELTKSEQSIKTQEKQKADTERDIESLELNIKQIETSQQQ
LKVLEKQIADTTEKYEHSTRNFNQEACRKVIASKKANRDKKQAQFKQLDDQLTFLSSIAN
VKTEIGLKEKELEKKNHEVQRVRSKHADNLSKFFKESISSNYRRAMQNEYDKLRREIDEL
NVDANGKNLAKQSHEIKRKNLIEEIARMEKEVQDSEERIYQKCHGKPYDELLLRSKTDIA
KLQLEHGALKSAEAMYKKYIQKINEEPSCPLCHHNMSGDEACDLTTELTDEIQKLPDNIS
RTEKSLKTEQSKYEQLLQIKPTIDKVKELKEKLPKKKEELRTIEQSLGDIVSEYETLMAR
LGEPTHNMDLANSMLGDMTLLDEALKESVRVKKDLEQLKLKLPDNYDASVSIEDLQKQKA
EVSRELEAESKALETSQQAFEQQVEALSRLREFLNGLKDKRINLQEGVQNLPQLKERLDK
LTRMVIAIGTEVTELRSKLQPIKQRLGAALSEKARLKEIERVKLEQLQAKYMEYKSIDKD
IQRLNDQAQEFAKLDLVNAIKKFDASINATKEELSNLDTHINEKNDELEAIKKKCFDQQA
LERDLKDNRELKQLQLKESALSEDCKRLAKQLGNLDFRSVTKEKNELIRKRDVATVRRGE
LLGQQGEINNQVNKLQKEMAEPRYKESMKNYMRAKFEVAVKQCGIEDLGRHRQALDWALI
EFHKEKMNNINSLIREYWRMIYRGNDIDYIQIKTDDSPSDTAADRRKNYNYCVVQSKNNS
VIDMRGRCSAGQRVLGSLIIRMALAETFSSNCGVLALDEPTTNLDRDNIMSLCDALNRIV
ESRQHQSNFMLIIITHDENFISSLGKITDYHRVYRNSECKSVIQKVRVDGGH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcgacaattgagaagctctctatacaaggtgtacgcagctttggcgttaatgccgaa
gatatgcagagtatcaccttctcgtcgcccattacgctgatcctgggtcaaaacggatgc
ggcaagacaacaattattgaatgcctgaaatatgccctcacaggcgaatatccgcccggc
agcagcagcggcaagaacttcgtgcacgatcccaatatatttgacaaaaatgagtcgttg
gctcaagtgaaaatgctagtgtgcgaccgtcgaaatgtccagatgtccatttgccgtagc
atgaaagttacaaaagttagagccggtcttacctttaagaccatagattccacgattaat
tttttgggtggcgacgggaagccgtcaaagaacagccaagagtcgatgagctctcgcgtc
atcaatacggatatggctattagcgatttcatgggcgtatccaaggcaataataaacagt
gttttattttgccatcaagaggactccagctggccactggatgagcccaaaaagctgaag
gagaagttcgatgcgatctttggcataacggagtacaacaaagcactcgacaggatcatc
aagttgcgaaagacagccgtggaggagcttaaagtaatgaatgcaaacttgaagctcttg
gagcatttcaagaaagaaatggacgagaaaacgatgaatctgcagaatgcgcagcgtaaa
tgtgaggaaattaaggaggagtgcatcaaatgtgatgaggaagtaaagccaattgatgct
agactgaaggagatacggaatattgaatacgaaattggggaatatcaggcggaaaaagtc
aaagtcgataccaagcaccaaagttgtgtggagcaaatagccaagctaaatagacagatc
aagacgccctttgagggctctctcgtggaattggaggcagagatacgtagcttcagtcag
cgaatgtccgaaataaaatatcaacttactgatgtcgaggaacaacttctgcaaaagcgt
aagtcgaaggaagaacagcagaaaacgctggccaagcaggatagagaacgctacgtggca
caacaaaagctgaagagcgagcaggaatgtaagctggagctctcgcgacacattcagact
ttgagcgctcaactgcaactcaatgtggaggcatcagtcgtggataatccacagaaatta
attgatcttctggatgacatcgatgggaatcttatggccaagcagtgtgagatcacagaa
ctgtcacagagcaatgatcaggcggatcaagcgcgtcaggaaaaaatcgatgagctgcgc
aacgagctaaccaaatcggagcagagcataaaaacacaggaaaagcaaaaggcggacacc
gaacgagatatcgaatcactggagctgaatatcaaacaaatcgaaacttcacaacagcag
ctcaaagtactcgagaagcaaatcgctgacacaactgaaaaatacgagcattccacgcgc
aacttcaatcaggaggcatgtcgtaaggttatagccagcaaaaaggcgaacagagacaag
aaacaggcgcagtttaagcagctcgacgatcagctcacattcctcagctccatcgctaat
gtgaagactgagatcggactcaaagagaaagagctggagaagaagaaccatgaggtacaa
cgtgtgcgcagcaaacacgccgataatctgagcaaatttttcaaagaatcaatatcaagc
aattatcgtcgggccatgcaaaatgaatacgataagctacggcgagagattgatgagttg
aacgtggatgccaacggtaaaaatttggcgaaacaatcacatgagatcaagcgcaagaac
ctaattgaagaaatcgcgcgcatggagaaggaagtgcaggactctgaagagcgcatttat
caaaagtgccatggcaaaccctatgatgagctgctgctgcgcagcaaaacagacatagcc
aagctacagctggagcatggagcactcaagtctgccgaggccatgtacaagaagtatata
caaaaaataaatgaagagcccagctgtccgttgtgtcatcacaatatgtcaggggatgag
gcctgcgatttgactaccgagttgacggatgaaatacaaaagttgccggacaacataagc
cgcactgaaaaatccctaaagacagagcaatcgaagtatgagcagttactgcagatcaag
ccaaccatcgacaaagttaaggagttgaaggagaagctgcccaagaagaaggaagagctg
cgaaccattgaacaaagtctgggtgacatagtcagcgaatatgagacgctaatggctcga
ctaggtgagccgacgcacaatatggacttggccaattcgatgctaggcgatatgaccctg
ctagatgaggcgctgaaggaatctgtgcgcgttaaaaaggatctagaacagctaaaactt
aagttgccagataactatgatgccagcgtctccatagaagatttgcaaaagcaaaaggct
gaggtgtccagagagctagaggctgaatccaaagcgctggagaccagtcagcaagcattc
gagcagcaagtggaggcactgagccgcttgcgtgaatttctaaatggcttaaaggacaaa
cgtataaatctgcaggagggcgtacagaatctaccccaattgaaggaacgtttggacaag
ctaacacgcatggtcatcgctattggcacggaagtaacggagctccgatcaaagctgcag
ccgatcaagcagaggctgggcgcagccttgagcgagaaggcgcgcttgaaagaaattgag
cgtgttaagctggagcaattgcaggctaaatatatggaatataaaagcatcgataaggat
atacaaagattgaacgaccaggcgcaggagtttgccaagttagatctagtgaatgccatc
aaaaaattcgatgcctccatcaatgcaaccaaagaggagcttagcaatttggatacacat
atcaacgaaaagaacgatgaactggaagccattaagaagaaatgctttgatcaacaggct
ctggagcgcgatctaaaggacaatcgcgagttaaagcagctgcagctgaaggaaagcgca
ttaagtgaagattgtaagaggctagcaaagcaattgggaaatctcgattttcgcagcgtc
acaaaggagaagaatgagctgataaggaaacgtgatgtggccaccgtgcgacgtggcgag
ctgctcgggcagcagggcgaaattaacaatcaagtgaataagctccagaaagagatggcc
gagccgaggtataaggagtccatgaagaactatatgcgagccaagttcgaggtggctgtg
aagcaatgtggcatcgaagacctgggccgtcatcgtcaggccttggattgggcgctgatt
gagtttcacaaggagaaaatgaataacataaacagcttgattcgggagtattggcgcatg
atctatcgtggcaatgatattgattatatacagatcaaaaccgatgacagtccaagtgat
acagcggccgatcggcgcaagaactataactattgtgtggtccagtcgaagaataactcc
gtgatcgatatgcgtggccgatgcagtgcaggacaacgtgtcctgggctcactcatcatt
cgcatggccctggcggagacgtttagcagcaactgcggtgttctggccttggatgagccc
acaacgaatctggatcgtgataatataatgtcattatgcgatgccctcaatcgcatcgtc
gaaagtcgccagcatcaatcgaatttcatgctcatcataattacgcacgacgagaatttc
atctcatcgctgggcaaaataacagattatcatcgagtgtatcgcaactctgaatgcaaa
tcggtgatacaaaaagttcgagtcgatgggggtcactag

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