Drosophila mojavensis: Dmoj_GI19621
Help
Entry
Dmoj_GI19621 CDS
T01062
Name
(GenBank) uncharacterized protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dmo
Drosophila mojavensis
Pathway
dmo03440
Homologous recombination
dmo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dmoj_GI19621
03450 Non-homologous end-joining
Dmoj_GI19621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmo03032
]
Dmoj_GI19621
03400 DNA repair and recombination proteins [BR:
dmo03400
]
Dmoj_GI19621
DNA replication proteins [BR:
dmo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
Dmoj_GI19621
DNA repair and recombination proteins [BR:
dmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
Dmoj_GI19621
BRCA1-C complex
Dmoj_GI19621
NHEJ (non-homologous end-joining)
MRX complex
Dmoj_GI19621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_16
TPR_MLP1_2
YdjO
DUF7532
AAA_13
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EDW08362
UniProt:
B4KS80
LinkDB
All DBs
AA seq
1312 aa
AA seq
DB search
MSTIEKLSIQGVRSFGVNAEDMQSITFSSPITLILGQNGCGKTTIIECLKYALTGEYPPG
SSSGKNFVHDPNIFDKNESLAQVKMLVCDRRNVQMSICRSMKVTKVRAGLTFKTIDSTIN
FLGGDGKPSKNSQESMSSRVINTDMAISDFMGVSKAIINSVLFCHQEDSSWPLDEPKKLK
EKFDAIFGITEYNKALDRIIKLRKTAVEELKVMNANLKLLEHFKKEMDEKTMNLQNAQRK
CEEIKEECIKCDEEVKPIDARLKEIRNIEYEIGEYQAEKVKVDTKHQSCVEQIAKLNRQI
KTPFEGSLVELEAEIRSFSQRMSEIKYQLTDVEEQLLQKRKSKEEQQKTLAKQDRERYVA
QQKLKSEQECKLELSRHIQTLSAQLQLNVEASVVDNPQKLIDLLDDIDGNLMAKQCEITE
LSQSNDQADQARQEKIDELRNELTKSEQSIKTQEKQKADTERDIESLELNIKQIETSQQQ
LKVLEKQIADTTEKYEHSTRNFNQEACRKVIASKKANRDKKQAQFKQLDDQLTFLSSIAN
VKTEIGLKEKELEKKNHEVQRVRSKHADNLSKFFKESISSNYRRAMQNEYDKLRREIDEL
NVDANGKNLAKQSHEIKRKNLIEEIARMEKEVQDSEERIYQKCHGKPYDELLLRSKTDIA
KLQLEHGALKSAEAMYKKYIQKINEEPSCPLCHHNMSGDEACDLTTELTDEIQKLPDNIS
RTEKSLKTEQSKYEQLLQIKPTIDKVKELKEKLPKKKEELRTIEQSLGDIVSEYETLMAR
LGEPTHNMDLANSMLGDMTLLDEALKESVRVKKDLEQLKLKLPDNYDASVSIEDLQKQKA
EVSRELEAESKALETSQQAFEQQVEALSRLREFLNGLKDKRINLQEGVQNLPQLKERLDK
LTRMVIAIGTEVTELRSKLQPIKQRLGAALSEKARLKEIERVKLEQLQAKYMEYKSIDKD
IQRLNDQAQEFAKLDLVNAIKKFDASINATKEELSNLDTHINEKNDELEAIKKKCFDQQA
LERDLKDNRELKQLQLKESALSEDCKRLAKQLGNLDFRSVTKEKNELIRKRDVATVRRGE
LLGQQGEINNQVNKLQKEMAEPRYKESMKNYMRAKFEVAVKQCGIEDLGRHRQALDWALI
EFHKEKMNNINSLIREYWRMIYRGNDIDYIQIKTDDSPSDTAADRRKNYNYCVVQSKNNS
VIDMRGRCSAGQRVLGSLIIRMALAETFSSNCGVLALDEPTTNLDRDNIMSLCDALNRIV
ESRQHQSNFMLIIITHDENFISSLGKITDYHRVYRNSECKSVIQKVRVDGGH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaattgagaagctctctatacaaggtgtacgcagctttggcgttaatgccgaa
gatatgcagagtatcaccttctcgtcgcccattacgctgatcctgggtcaaaacggatgc
ggcaagacaacaattattgaatgcctgaaatatgccctcacaggcgaatatccgcccggc
agcagcagcggcaagaacttcgtgcacgatcccaatatatttgacaaaaatgagtcgttg
gctcaagtgaaaatgctagtgtgcgaccgtcgaaatgtccagatgtccatttgccgtagc
atgaaagttacaaaagttagagccggtcttacctttaagaccatagattccacgattaat
tttttgggtggcgacgggaagccgtcaaagaacagccaagagtcgatgagctctcgcgtc
atcaatacggatatggctattagcgatttcatgggcgtatccaaggcaataataaacagt
gttttattttgccatcaagaggactccagctggccactggatgagcccaaaaagctgaag
gagaagttcgatgcgatctttggcataacggagtacaacaaagcactcgacaggatcatc
aagttgcgaaagacagccgtggaggagcttaaagtaatgaatgcaaacttgaagctcttg
gagcatttcaagaaagaaatggacgagaaaacgatgaatctgcagaatgcgcagcgtaaa
tgtgaggaaattaaggaggagtgcatcaaatgtgatgaggaagtaaagccaattgatgct
agactgaaggagatacggaatattgaatacgaaattggggaatatcaggcggaaaaagtc
aaagtcgataccaagcaccaaagttgtgtggagcaaatagccaagctaaatagacagatc
aagacgccctttgagggctctctcgtggaattggaggcagagatacgtagcttcagtcag
cgaatgtccgaaataaaatatcaacttactgatgtcgaggaacaacttctgcaaaagcgt
aagtcgaaggaagaacagcagaaaacgctggccaagcaggatagagaacgctacgtggca
caacaaaagctgaagagcgagcaggaatgtaagctggagctctcgcgacacattcagact
ttgagcgctcaactgcaactcaatgtggaggcatcagtcgtggataatccacagaaatta
attgatcttctggatgacatcgatgggaatcttatggccaagcagtgtgagatcacagaa
ctgtcacagagcaatgatcaggcggatcaagcgcgtcaggaaaaaatcgatgagctgcgc
aacgagctaaccaaatcggagcagagcataaaaacacaggaaaagcaaaaggcggacacc
gaacgagatatcgaatcactggagctgaatatcaaacaaatcgaaacttcacaacagcag
ctcaaagtactcgagaagcaaatcgctgacacaactgaaaaatacgagcattccacgcgc
aacttcaatcaggaggcatgtcgtaaggttatagccagcaaaaaggcgaacagagacaag
aaacaggcgcagtttaagcagctcgacgatcagctcacattcctcagctccatcgctaat
gtgaagactgagatcggactcaaagagaaagagctggagaagaagaaccatgaggtacaa
cgtgtgcgcagcaaacacgccgataatctgagcaaatttttcaaagaatcaatatcaagc
aattatcgtcgggccatgcaaaatgaatacgataagctacggcgagagattgatgagttg
aacgtggatgccaacggtaaaaatttggcgaaacaatcacatgagatcaagcgcaagaac
ctaattgaagaaatcgcgcgcatggagaaggaagtgcaggactctgaagagcgcatttat
caaaagtgccatggcaaaccctatgatgagctgctgctgcgcagcaaaacagacatagcc
aagctacagctggagcatggagcactcaagtctgccgaggccatgtacaagaagtatata
caaaaaataaatgaagagcccagctgtccgttgtgtcatcacaatatgtcaggggatgag
gcctgcgatttgactaccgagttgacggatgaaatacaaaagttgccggacaacataagc
cgcactgaaaaatccctaaagacagagcaatcgaagtatgagcagttactgcagatcaag
ccaaccatcgacaaagttaaggagttgaaggagaagctgcccaagaagaaggaagagctg
cgaaccattgaacaaagtctgggtgacatagtcagcgaatatgagacgctaatggctcga
ctaggtgagccgacgcacaatatggacttggccaattcgatgctaggcgatatgaccctg
ctagatgaggcgctgaaggaatctgtgcgcgttaaaaaggatctagaacagctaaaactt
aagttgccagataactatgatgccagcgtctccatagaagatttgcaaaagcaaaaggct
gaggtgtccagagagctagaggctgaatccaaagcgctggagaccagtcagcaagcattc
gagcagcaagtggaggcactgagccgcttgcgtgaatttctaaatggcttaaaggacaaa
cgtataaatctgcaggagggcgtacagaatctaccccaattgaaggaacgtttggacaag
ctaacacgcatggtcatcgctattggcacggaagtaacggagctccgatcaaagctgcag
ccgatcaagcagaggctgggcgcagccttgagcgagaaggcgcgcttgaaagaaattgag
cgtgttaagctggagcaattgcaggctaaatatatggaatataaaagcatcgataaggat
atacaaagattgaacgaccaggcgcaggagtttgccaagttagatctagtgaatgccatc
aaaaaattcgatgcctccatcaatgcaaccaaagaggagcttagcaatttggatacacat
atcaacgaaaagaacgatgaactggaagccattaagaagaaatgctttgatcaacaggct
ctggagcgcgatctaaaggacaatcgcgagttaaagcagctgcagctgaaggaaagcgca
ttaagtgaagattgtaagaggctagcaaagcaattgggaaatctcgattttcgcagcgtc
acaaaggagaagaatgagctgataaggaaacgtgatgtggccaccgtgcgacgtggcgag
ctgctcgggcagcagggcgaaattaacaatcaagtgaataagctccagaaagagatggcc
gagccgaggtataaggagtccatgaagaactatatgcgagccaagttcgaggtggctgtg
aagcaatgtggcatcgaagacctgggccgtcatcgtcaggccttggattgggcgctgatt
gagtttcacaaggagaaaatgaataacataaacagcttgattcgggagtattggcgcatg
atctatcgtggcaatgatattgattatatacagatcaaaaccgatgacagtccaagtgat
acagcggccgatcggcgcaagaactataactattgtgtggtccagtcgaagaataactcc
gtgatcgatatgcgtggccgatgcagtgcaggacaacgtgtcctgggctcactcatcatt
cgcatggccctggcggagacgtttagcagcaactgcggtgttctggccttggatgagccc
acaacgaatctggatcgtgataatataatgtcattatgcgatgccctcaatcgcatcgtc
gaaagtcgccagcatcaatcgaatttcatgctcatcataattacgcacgacgagaatttc
atctcatcgctgggcaaaataacagattatcatcgagtgtatcgcaactctgaatgcaaa
tcggtgatacaaaaagttcgagtcgatgggggtcactag
DBGET
integrated database retrieval system