KEGG   Drosophila mojavensis: Dmoj_GI21053
Entry
Dmoj_GI21053      CDS       T01062                                 
Name
(GenBank) uncharacterized protein
  KO
K12879  THO complex subunit 2
Organism
dmo  Drosophila mojavensis
Pathway
dmo03013  Nucleocytoplasmic transport
dmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmoj_GI21053
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dmoj_GI21053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmo03019]
    Dmoj_GI21053
   03041 Spliceosome [BR:dmo03041]
    Dmoj_GI21053
Messenger RNA biogenesis [BR:dmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     Dmoj_GI21053
Spliceosome [BR:dmo03041]
 Complex C
  Other components
   EJC/TREX
    Dmoj_GI21053
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Dmoj_GI21053
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 Cupin_NOL9 TPR_19
Other DBs
NCBI-ProteinID: EDW13246
UniProt: B4KGP6
LinkDB
AA seq 1622 aa
MRRLKKLSKSHSVTGTQESDAAPTTTTATTAPDAATLTDANGNGGSVNKETLLNTDIFKH
FDKSGRNEFLKYLKQQLQDSPESPVFDRHGTFKRGISNAIYELLWQALRYKLKKDVVLHV
LTDVVALHKEFPSLILDVVNILDSETSLMTEGLQEERHGFVQIVKDLDKVLPESLLKERL
EIDTLQEVGIVKNKSFYTKFIKVKTKLYYKQRRFNLFREESEGFVKLITEMNQDFEEHTT
PDTIMDIIKSLIGCFNLDPNRVLDIIIESLRRSLYHVCALLLKHGVIELNDVYVWLTPND
GSIRAQWEEELADAREMVRKLHVISTNKKEDDKEPPPPPTTKKFDEEKYNANQKFGLCEA
LLKVGDWDNALKIIQKLPDQSVVVQDPIARAIVELVHLSVEQIYYKKVFKAPAGRKPSRN
RLYDDAALVAKMQAQDFSDLRKYTWPMANVLGPAMHCDTVLMYKLVRIMGKILLDMGVDN
LNGPPPNSEQEQHYYDIITCLDASILPSLLYLDSNCSMSEEIWAVVKFFPYHLRYSMYAR
WKNDSYQMHPNLIRRCGLAQRDIKALMKRVSKENVKPLGRLVGKYSHCTPGLLFDYILVQ
IQIYDNLIGPVCDMLKYLTALSFDCLGYCIIESLTMTGRGRFKDDGTSLSLWLQSLASFC
GTIYKKYSIEMSGLLQYVANQLKSQKSLDLLVLRELVHKMAGVESCEEMTNDQLQALCGG
EQLRGEAGYFSQVRNTKKSSNRLKEALANNDLAVTLCLLMAQQKHCVIYRETAAHSHLKL
VGSLYDQCQDALVQFGTFLGSTYSVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQ
INQKYDQLRKADPNAKKLTTAQKLQKYLEATQLIMNPIVESVRPLHSAKVWEDISPQFLV
TFWSLSMYDLHVPNEIYQREIGKLKQLAQQAADGKDSNQSKNKKEQERYIALMEKLNDER
KKQHEHVDKILQRLQEQKDGWFLLRSAKSAKNDTITQFLQLCLFPRCTFTALDALYCAKF
VQTIHNLKTANFSTLLCYDRLFCDITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAV
FNKECANYPGFVTKFRVSNQFSEANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQI
RNALIILMRILPHYPVLSKLAQIIERKVDKVREEEKTKRPDLFAIASSYIGQLKLKSPHM
FKESDFHQVAERPVKEAAPAPPGSAVKVQPGEKANASAATTTTTPTTKTVSSSSFYDPKA
SGKEADAKTAQAARGDAKPSKPEGTASTVVSISKAVSAPSNSERESKRDASTSAVRETQS
HRNMDAKEEQQQSNSSSTNHNNNNSNSNNSNSNGGQNERRSRERDREREERHSLSSTRSS
QRESNRNSNKERTEAELQQRARERTQRLEELELAAMRAQKREKLSRRDERSQYRHEGVET
VDLVTGGGNSGQDHRHYDDYQRDRDLSSVSNESNGSLQHRRSHETIEYDKDSKRRKLESS
TSSSKKVEELVDSVKKARGLKTKERNKDKLSDEERDARKDRKLGRKRDRNEESSTSDHKR
RREAQNGDDDIRERERHREKSRERSHDKFDRERGAGGGGGSARGDDRQYSISKSTRSSRM
NY
NT seq 4869 nt   +upstreamnt  +downstreamnt
atgcgtcgcttgaagaaactgtcgaagagtcacagcgtgacgggtacgcaagaaagcgat
gcagcgccgacgacgaccacagcaacaacggcgcccgatgcggcgaccctgacggatgcc
aatggaaatggcggcagtgtgaataaagaaacactactcaatacagatatttttaaacac
tttgataagtctggccgaaacgaatttttaaagtacttgaagcaacagttgcaggatagc
ccagaaagtccagtcttcgatcggcatggcacatttaaacgcgggatctcaaacgccata
tacgagttgctctggcaagcattgcgttacaagctcaagaaagatgtcgtgctgcatgtg
ctcacagatgttgtggcgctgcataaggagtttcccagtcttatattggacgtggtcaac
attttggatagtgagacatccttgatgaccgagggcttacaggaggagcgccatggattt
gtacaaattgttaaggatctggacaaggtgctgccggagagtttgcttaaagaacgcttg
gaaatagatacgctgcaggaagtgggcattgtgaagaacaaaagtttctacactaaattc
atcaaagtcaagactaagctctactacaaacagcgccgctttaatctttttcgcgaggag
agtgaaggatttgtcaagcttatcacggaaatgaatcaggatttcgaggagcacacaaca
cctgacacaataatggatataataaaatcattaattggctgcttcaatcttgatcccaat
cgcgtactggatattataattgaatccttgagacgttcgttataccatgtctgtgctttg
ctgctcaagcatggagtcattgaactgaatgatgtgtatgtctggttaacgcccaatgat
ggaagcatacgtgcacagtgggaggaggagcttgccgacgccagggaaatggtacgtaaa
cttcatgtgatctccactaacaagaaggaggatgacaaagagccaccaccaccaccaacc
actaagaaatttgatgaggagaaatacaatgctaatcagaagtttggactgtgcgaggca
ttgctcaaagttggcgactgggacaatgcactcaaaatcatacagaaactgccagatcaa
tcagttgtggttcaagatccaatcgcacgtgccatcgtggagttggtgcatctgtcagtt
gagcagatttattacaagaaagtcttcaaagctcctgccggtcgtaagcccagccgcaat
cgcttgtacgacgatgccgccctggtggctaagatgcaggcgcaggacttttccgacttg
cgcaaatacacatggcccatggccaatgttctgggtccagcaatgcactgcgacacggtg
ttgatgtacaaactggtgcgaattatgggcaaaatattattggacatgggcgtggacaac
ttgaatggtccacctccgaattcggagcaagagcagcattattacgatatcattacctgt
ttggatgccagcatattgccctctttgctgtatttggatagcaattgttccatgtccgaa
gagatttgggctgtggttaaattctttccatatcatttgcgctacagcatgtacgctcgc
tggaagaatgacagctatcagatgcaccctaatctgatacgtcgctgcggtctggcacag
cgggacataaaggcacttatgaaacgtgtgagcaaggagaatgtgaagcccttggggcgt
ctagttggcaaatatagccactgcacgcctggtctgctgttcgattatatccttgttcaa
atccaaatttatgacaatttgattggcccggtctgtgacatgcttaagtatttgactgct
ttatcgtttgattgcctgggatattgcatcattgaatcgcttaccatgacgggtcgcggc
cgatttaaggacgacggcacctcgctctcattatggttgcagagccttgcttccttctgt
ggcaccatctacaaaaagtacagcatcgaaatgagcggcctgcttcagtatgtagccaac
caactgaagtcgcagaagagtctggatttgctagttctgcgcgaacttgtccacaaaatg
gcgggtgtggagtcgtgcgaagagatgacaaacgatcagctgcaagcgctttgtggcggt
gagcagctgcgtggcgaggcgggctactttagccaggtgcgcaacacaaagaagtcttcg
aatcgcttgaaggaggcgttagccaacaatgatctcgccgtcacactttgcctgctgatg
gcacagcagaaacattgcgttatatatcgcgaaacggctgcgcatagtcacttgaagctt
gtgggcagcttgtatgatcagtgccaggatgccctggtgcagtttggcacattcttgggc
tccacttattcggtggacgagtatgtcgaacgccttccatcaattattaccatgttgcgt
gaataccacattaacaccgatgtggccttcttcttggcacgccctatgttcacgcaccag
attaatcaaaaatatgatcaattgcgtaaggcggatcccaatgccaaaaaactgacgaca
gcccaaaagctgcaaaagtatttggaggcgacgcagttgatcatgaatcctattgtggag
tcggtgcgaccgttgcacagcgccaaagtctgggaggacataagtcctcagtttctggtc
accttctggagtctaagtatgtacgatttgcatgtgccgaatgagatttatcagcgagag
attggcaagctaaagcagttggcacagcaagctgccgatggcaaggactcgaaccagtcc
aagaacaagaaggagcaggagcgctatattgcgctcatggagaagctaaatgacgagcgt
aagaaacaacatgagcatgttgataaaattctgcaacgtctgcaagagcaaaaagatggc
tggtttctgttgcgctccgccaaatcagcgaaaaatgataccattacacagttcctgcag
ctatgcctctttccgcgctgcaccttcactgccctggacgcgctctactgtgccaagttc
gttcaaactatacataatttgaagacggcgaatttctccacgttgctctgttacgatcgg
ctcttctgcgacattacatactctgtcacatcttgcacggagggtgaggcgacgcgttat
ggtcgctttttgtgtgccatgctggagacggtaatgcgttggcatgcagatcaggctgtt
ttcaataaggagtgtgcaaattatcctggctttgtaaccaaattccgcgtcagcaatcag
ttctcggaggccaacgatcatgttggctacgaaaactatcgccatgtatgccacaagtgg
cactacaagattacaaaggcaattgtgttctgtcttgattctaaggacttcatgcaaata
cgcaatgcgcttatcatactgatgcgcattttgccccattatccggtgctatccaagcta
gcgcagatcatcgagcgcaaggtggacaaagtgcgcgaggaggagaaaaccaagcgaccg
gatttgtttgccatcgcctccagctatattggccagttaaaactaaagtctcctcatatg
ttcaaagagagcgacttccatcaggtcgccgagcggccggtaaaggaagcagcgcccgca
ccgcctggtagcgccgtcaaggtgcagcccggcgaaaaagcaaatgcatctgctgccaca
acgacgaccacaccaacaacaaaaacggtcagtagttcgtctttctatgatccaaaggca
tcaggaaaagaggcggacgcaaagactgctcaagcagcgcgtggcgatgccaagcccagc
aaaccagagggcacggcatctactgtggtctccatctcaaaggccgtctcagcaccatcc
aatagcgagcgtgagagtaagagggatgcgtcaacatcagcggtcagggaaacccaatct
catcggaacatggatgccaaggaagagcaacagcagtccaatagcagcagtactaaccac
aacaacaacaatagcaacagtaacaatagcaacagcaatggcggacaaaacgaacgacgc
agccgggagagagatcgggaacgtgaagagcgccacagcttaagcagcacgcgcagttca
cagcgcgagagcaaccgcaacagcaataaggagcgtaccgaggccgagctgcagcagcga
gcacgcgagcgcacacagcgtcttgaggagctggaacttgccgctatgcgggcacagaaa
cgagagaagctatcacgacgcgatgagcgaagccagtatcggcatgagggagtcgaaaca
gttgatctggtgacgggcggcggcaacagcggccaggatcatcgccactatgatgactac
caaagggaccgcgatctgagttcggtgtccaatgagagcaacggttcgctgcagcatcga
cgtagtcacgaaactattgaatatgataaagattcaaagcgtcgtaaattggaatcatct
acaagcagttcaaagaaggtagaagagctcgtagatagtgtgaagaaagcgcgcggcctg
aagaccaaagagcgcaacaaggacaagctgtctgatgaggagcgtgatgcgcgcaaggat
cgcaagctaggacggaagcgagaccgcaacgaggagtccagcaccagcgaccacaagcgt
cggcgtgaagcacaaaacggcgatgacgacatccgcgaacgggaacgccatagagaaaaa
tcccgagaacgctcacatgacaaattcgatcgagaacgtggcgccggtggaggtggtggc
agtgcacgaggtgatgatcgtcaatacagtatctcgaagtcgacacgttcctcgagaatg
aactattga

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