Drosophila mojavensis: Dmoj_GI23040 Help Entry Dmoj_GI23040      CDS       T01062                                  Name (GenBank) uncharacterized protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism dmo  Drosophila mojavensis Pathway dmo03020   RNA polymerase dmo03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:dmo00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     Dmoj_GI23040   09124 Replication and repair    03420 Nucleotide excision repair     Dmoj_GI23040  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dmo03021]     Dmoj_GI23040    03400 DNA repair and recombination proteins [BR:dmo03400]     Dmoj_GI23040 Enzymes [BR:dmo01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      Dmoj_GI23040 Transcription machinery [BR:dmo03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      Dmoj_GI23040 DNA repair and recombination proteins [BR:dmo03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       Dmoj_GI23040 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF5817 Motif Other DBs NCBI-ProteinID:  EDW14962 UniProt:  B4KDW5 LinkDB All DBs AA seq 1176 aa AA seqDB search MMYDNEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT YSAPLYVDITKTKNVEGMDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS EVSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKTHVEMLKERDYNNYSWQVLVAS GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAENKRVGDQEENFEKPHRGTCQ GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVS NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atgatgtacgataatgaagaagagaatttcgatgaggaaaatgctgaggaaatctctcac gagctgtggcaggaggcctgttggatcgtgatcaacgcttatttcgacgagaaaggcctt gtgcgtcagcagctggacagcttcgatgagttcatacaaatgtctgtgcagcgcattgtt gaggactcgccggctattgagctgcaggctgaggcccagcatacgtccggcgaagtggag acacctcctcgattttccctaaaattcgaacagatttacttgtccaagccgacgcattgg gaaaaggatggctctcccagtcctatgatgcccaacgaggcgcgcttgcgcaatttgacc tactcggctcctctatatgtggatattacaaagacaaagaatgtcgagggcatggatccc gtggagacgcagcatcagaaaacgttcattggcaaaattcccatcatgttgcgatcaaca tattgcctgctctcacagctcaccgatcgtgatttgactgagcttaacgagtgtccgcta gatccgggtggttacttcatcattaacggttcggagaaagtgctcatcgctcaggagaag atggctacgaacaccgtgtacgtattcagcatgaaggacggcaagtacgcattcaaaacg gagatacgctcctgcctggagcacagctcgcgccccacctccacgctctgggtgaacatg atggcgcgtggctcgcaaaacatcaagaaatcggcgattggacagcggatcattgccatt ctcccgtacattaagcaagagatacccattatgatagtttttcgtgctctgggatttgtg gctgatcgcgatattttggagcacattatatacgactttgacgatccagagatgatggag atggtgaagccctccctggacgaggccttcgtggtgcaggagcagaatgtcgcccttaat ttcatcggcgctcgcggcgcacgccccggcgtcaccaaggacaagcgtataaagtacgcc aaggaaattctgcagaaggaaatgttgccgcatgtcggcgtctctgatttttgcgagaca aagaaggcctattttctagggtacatggtgcatcgcttgcttctggcctcgctgggtcgc cgagagctcgacgatcgtgatcattatggcaacaagcgcctggatcttgctggtcctctg ctggccttccttttccgtggcctcttcaagaatttgatgaaggaggtgcgcatgtacaca cagaagttcattgaccgcggcaaggacttcaatctggagctggccataaagacaaacatt atcactgacggtctgcgctactcgctggccaccggcaactggggcgatcagaagaaggcg catcaggctcgcgccggcgtctcgcaggtgttgaatcgtctcacattcgcctccacattg tcccatttgcgtcgcgtcaactcacccattggacgcgacggcaagctggccaagccacgt cagttgcataacacactgtggggcatgttgtgtccggcagaaacgcctgagggcgcagct gtgggattggtaaagaatctggcactgatggcttacatttccgtgggctcacagccgtcg ccgattctggagttcttggaagagtggtctatggagaatctggaggaaatcgcgccctct gcgattgcagatgctaccaaaatcttcgtgaatggctgttgggtgggcatacatcgagac cccgagcaactgatggccacactgcgtaagctgcgccgtcagatggacatcattgtatca gaggtgtccatgattcgcgacattcgcgatcgtgagatccgaatctacacagatgcgggt cgcatttgtagacctctgcttattgtcgagaatggcacgctgctgttgaagaagactcac gtggagatgttgaaggagcgagactacaacaactacagctggcaggtgctggttgcttct ggtgtcgttgaatacattgacacactcgaggaggaaacggtcatgattgccatgtcgccc tacgatctcaagcaggacaaggactacgcctattgtaccacctacactcactgtgagatt catccggccatgatcttaggtgtctgtgcctctattatacccttccccgatcacaatcag agtccacgtaacacctatcaaagcgctatgggtaagcaggctatgggtgtttatataacc aacttccacgtacgtatggataccctggcgcacgtgctgtattatcccatgaagccattg gtgacaactcgatccatggagtatttgcgtttccgtgagcttcctgcgggcatcaattcg attgtggctattttgtgctacactggctacaaccaggaggattccgttattctgaacgcc tccgccgtggagcgtggcttcttccgatcggtgttctatcgatcgtacaaggatgcggag aataaacgcgtcggtgatcaagaagagaactttgagaaaccgcatcgcggcacctgccag ggcatgcgaaacgctcattatgacaaactggacgatgatggcatcatcgcgcctggcatt cgtgtctctggcgacgatgtcgtcattggcaagacaattacgctacccgagaacgacgat gaactggacagcaatacaaagcgattcgccaagcgcgatgcctccacatttttgcgtaac tctgagacgggcattgtggatcaggttatgttgacactaaacagcgagggttacaagttc tgcaagattcgtgtgcgttccgtgcgcataccacagattggcgacaagttcgcctctcgt cacgggcagaagggaacatgtggcatccagtatcgtcaggaggacatgccgttcacctgc gagggattggcgccagatattatcatcaatccccacgccattccctctcgtatgacaatt ggccatttgatcgagtgtctccagggaaagcttggctccaataagggcgaaatcggcgac gccacgcccttcaacgatgctgtaaacgtacaaaagatttctactttccttcaggagtac ggctaccatttgcgtggcaacgaggtcatgtacaatggccacactggacggaaaattaat gctcaggtatttttgggcccaacctactatcagcgcctcaagcatatggtggacgacaaa attcactcccgtgcccgtggtccagtgcagatcctagtgcgccagcctatggagggcaga gcccgtgatggcggcttgcgtttcggtgagatggagcgtgactgtcaaatctctcacggg gctgctcagttcttgcgcgagcgactgttcgaagtgtccgatccgtatcgcgtgcacatt tgcaacttttgcggcctgattgccattgccaatctgcgcaacaatacgttcgagtgcaaa ggctgcaagaacaagacgcagatctcgcaagtgagactgccgtacgcggccaagctgctc ttccaggagctcatgtcaatgaacatagcgccgcgcttgatggttagctga

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