Desulfoferula mesophila: FAK_00290
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Entry
FAK_00290 CDS
T09861
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dmp
Desulfoferula mesophila
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmp03009
]
FAK_00290 (rimO)
Enzymes [BR:
dmp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FAK_00290 (rimO)
Ribosome biogenesis [BR:
dmp03009
]
Prokaryotic type
ribosomal protein modification factors
FAK_00290 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BEQ12963
UniProt:
A0AAU9E719
LinkDB
All DBs
Position
complement(33105..34430)
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AA seq
441 aa
AA seq
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MSMADAGKTYYLLNLGCAKNLVEGEHLAGLLLADGWQAVEEPSKAGLLLVNTCGFIQPAV
EEALEAILELADLKCDDQRLVVAGCLVGRYGKKLATDLPEADLLLAPGEAPRLLAHLAAP
PAGRLAISPPRALFGGADPRALSTGPGWAYLRVADGCANSCAFCTIPHIRGPLRSRHLDD
LLAEAESLAALGVRELNLVAQDLTSYGRDLGGPGLAELLRALASIDGIEWIRPLYLHPDI
IDEALITTVLDEPKVTDYFDLPLQHAADPVLRAMGRRRSGSELRELVRGIRRAAPQATLR
TTLLVGHPGEGEREFALLKEFVAEMEFDRLGVFPYSPEAGTRSARMPAPPPAVAAQRAGR
IMDLQRRISRRRLAALEGATLPVLVLGPHPDSDLVWAGRTRGQAPEVDGLVIITEGTAPP
GAIADCRITATHDYDLEGALL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatggccgacgcgggcaagacctactacctgctcaacctgggctgcgccaagaac
ctggtggagggcgagcacctggccgggctgctcttggccgacggctggcaagcggtggag
gagccctcgaaggccgggctgttgttggtcaacacctgcggcttcatccagccggcggtg
gaagaggccctggaggcgatcctggagctggccgacctgaagtgcgacgaccagcgcctg
gtggtggccggctgcctggtggggcgctacggcaagaagctggcaacggacctgcccgag
gccgacctgctcttggcccccggcgaggccccccgcctgctggcccatctggccgccccc
ccggcgggccgcctggccatcagcccgccgcgcgccctgttcggcggggccgatccccgg
gcgctgagcaccgggccgggctgggcctatctgcgggtggccgacggctgcgccaactcc
tgcgccttttgcaccatcccccacatccgcggccccctgcgctcgcggcacctggacgat
ctcttggccgaggccgagagcctggccgccctgggagtgcgggagctgaacctggtggcc
caggaccttacgtcctatggccgcgacctgggcgggccgggcctggccgagctgctgcgc
gccctggcctccatcgatggcatcgagtggatccggccgctgtacctgcacccggacatc
atcgacgaggcgcttatcactaccgttttagatgagcccaaggtgaccgactatttcgac
ctgcccttgcagcacgcggccgacccggtgcttcgggccatgggccgccgccgcagcggg
agcgaactgcgcgagctggtgcggggcatccgccgggccgcgccccaggccacgctgcgc
accaccctgttggtgggccaccccggcgaaggcgaacgagagttcgcccttctcaaggag
ttcgtggccgagatggagttcgaccgcctgggggtgtttccctacagccccgaggcgggc
acccgcagcgcccgcatgcccgcgcccccgcccgccgtggccgcccagcgcgccgggcgg
atcatggacctgcagcggcgcatcagccgccgccgcctggccgccctggagggagccacc
ctgccggtgctggtcttgggcccccacccggacagcgacctggtttgggccgggcgcacc
cggggccaagccccggaggtggacggcctggtgatcatcaccgaaggcacggccccgccc
ggcgccatcgccgactgccgcatcaccgccacccacgactacgacctggaaggggcgctg
ctctaa
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