Desulfoferula mesophila: FAK_10700
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Entry
FAK_10700 CDS
T09861
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmp
Desulfoferula mesophila
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmp03016
]
FAK_10700 (truB)
Enzymes [BR:
dmp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FAK_10700 (truB)
Transfer RNA biogenesis [BR:
dmp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FAK_10700 (truB)
Prokaryotic type
FAK_10700 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BEQ14004
UniProt:
A0AAU9ELD4
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All DBs
Position
1212535..1213539
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AA seq
334 aa
AA seq
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MSRRRPKPSFLEDGVLVVNKPAGPTSHDVVERLRRRFRPAKLGHTGTLDPFATGVLVLAF
NRATRMSNLLSAGDKVYAGTVSLGTATDTGDPTGEVIETAPVPEIGPEQAAAALASLEGE
RMQAPPAYSAAKHQGKPLYAYARQGVAVEKEARPIRVEQARLRAVEPGEIAFELTCSKGT
YVRSLAEDLARELGTVGHLKELTRLASAPFGLDEALELEEALELSGKQMAERLIDLSQAL
ERAGLPAVEVDEDTAWQVRQGMILPREALLEPGSGPATGAFRVLTPEGELVAVLRWLEPD
ERRPGRDYESVRVFPAQDQGGLEDQTSASALGAE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgccggcccaagccgagcttcctggaggacggcgtgctggtggtgaacaaa
ccggccggccccaccagccacgacgtggtggagcgcctgcgccgccgcttccgcccggcc
aagctgggccataccggcaccctggacccgtttgccaccggggtgttggtcctggctttc
aaccgggccacccgcatgtccaaccttttgagcgcgggtgacaaagtttacgccgggacg
gtgagcctgggcacggccaccgacaccggagaccccaccggcgaggtgatcgaaaccgcg
ccggtgcccgagatcggccccgagcaagcggcggcggccctggcctccctggaaggggag
cgcatgcaggcgcctcccgcctattcggcggccaagcaccagggcaaacccctgtacgcc
tatgcgcgccagggggtggccgtggaaaaagaggctcgccccatacgggtggagcaggcc
aggctgcgggccgtggagccgggcgagatagcctttgagctgacctgctccaagggcacc
tacgtgcgctcgctggccgaggacttggccagggaactgggcacggtgggccacctcaag
gagctgacccgcctggcctcagcgcccttcggcctggacgaggccctggagctggaggag
gccctggagctgagcggcaagcaaatggccgagcggctcatcgacctcagccaggccctg
gagcgggccgggttgccggcggtggaggtggacgaagacaccgcctggcaggtgcgccag
ggaatgatcttgccccgcgaggccttgctggagcccggctccggcccggccacgggagcc
ttccgggtgcttaccccggagggcgagttggtggcggtgttgcgctggctggagccggac
gagcgccgccccggacgcgactatgaaagtgtgcgagtctttcccgcccaagaccaggga
gggctcgaggatcaaacatctgcgtcggccttgggtgccgaatag
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