Desulfoferula mesophila: FAK_11340
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Entry
FAK_11340 CDS
T09861
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAK_11340 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_11340 (nfo)
Enzymes [BR:
dmp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FAK_11340 (nfo)
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FAK_11340 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Kinase-like
Motif
Other DBs
NCBI-ProteinID:
BEQ14068
UniProt:
A0AAU9EWG9
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All DBs
Position
1280856..1281710
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AA seq
284 aa
AA seq
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MRFGIHLSVAGGPMRAAVEAKALGLECLQIFSGTPRTWKQKPLKKADAQAFARATDQAGL
DPVAVHAPYLINLAAGDHALWRRSYQALAAQLKRAAALGATAVVVHPGSRGRRELAWGLD
RAAEGARRALEAAGPGAALWLENTAGGGGHLGGDLGQLAGLLERLEGLAVGAVIDTAHAF
AAGYALDGYERARAFVDLLDAELGLERVRMWHLNDSDFPQGGLRDRHTHLGRGLLGEGCF
AALVEDKRLVGMGGVMETPKDTRWADRRNLAFLRRLRRRAGTRP
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttcggtatccatctgtccgtggccggggggcccatgcgggccgcggtggaggcc
aaggccctgggcctggagtgtttgcagatcttctcgggcactccgcgcacctggaaacag
aagccgctcaaaaaggccgacgcccaggcctttgcccgggcgacggaccaggcgggcctg
gacccggtggcggtgcacgccccctatctgatcaacctggccgccggggaccacgccctg
tggcggcgctcctaccaggccctggccgcccagctcaagcgggccgccgccctgggggcc
acagcggtggtggtgcatccgggcagccggggccggcgcgagctggcctggggcctggac
cgggcggccgagggagcccgccgggccctggaggcggccgggcccggtgcggccctgtgg
ctggaaaataccgccggcgggggagggcacctgggcggcgacctgggtcagttggccggg
ctgctggagcgcctggagggcctggccgtgggggcggtgatcgacacggcccacgccttt
gccgccggctacgccctggacggctatgagagggcgcgggcctttgtggacctcctggac
gcagagctgggcctagagcgggtccggatgtggcacctcaacgattccgatttcccccag
ggcggcttgcgggaccgccacacccatctgggccggggcctgttgggggagggctgcttc
gccgccctggtggaagacaagcgcctggttggcatgggcggggtgatggaaacccccaag
gacacccgctgggccgaccggcgcaacctggcctttttgcgccgcctgcgccgccgcgcg
gggaccaggccctag
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