Desulfoferula mesophila: FAK_12880
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Entry
FAK_12880 CDS
T09861
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03030
DNA replication
dmp03430
Mismatch repair
dmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAK_12880
03430 Mismatch repair
FAK_12880
03440 Homologous recombination
FAK_12880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmp03032
]
FAK_12880
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_12880
Enzymes [BR:
dmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAK_12880
DNA replication proteins [BR:
dmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAK_12880
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAK_12880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BEQ14222
UniProt:
A0AAU9EZF5
LinkDB
All DBs
Position
1440669..1441388
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AA seq
239 aa
AA seq
DB search
MKLWQAKLLNQATRARMAGRRLPEEARANLAVLDGLNGRASALAQRFVVVDLETTGLDHT
KDRVVSVGAFRVVEGRIRLGEVFSELANPGRGIPVESIKVHGITPDNIRDARPAWEVFRN
FLNYLGRDIVVAHYARFDMFFLNRVMRAQYGMRLQNLVMDTVLMCRAALIEPDPYGQKKG
AKRCSLDALAARYGLEVPERHTALGDAMATALILQRLLPELSEAGWKTLGDLVQVAGVQ
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttgtggcaggccaaactgttgaaccaggcgacgcgcgcgcgcatggccggccgg
cgcctgcccgaggaggcgcgggccaacctggcggtgctggacgggctcaacggtcgggct
tcggcgctggctcagcgtttcgtggtggtggacctggagaccaccggcctggaccacacc
aaggaccgggtggtgagcgtgggagccttccgggtggtggaggggcgcatccgtttgggg
gaggtgttcagcgaactggccaacccggggcggggcatcccggtggagtccataaaggtg
cacggcatcacgccggacaacattcgcgacgcccgcccggcctgggaagtgtttcgcaat
tttcttaattacctgggccgggacatcgtcgtggcccactatgcgcgctttgacatgttt
ttcttgaatcgggtgatgcgggcccaatacggcatgcgcctgcaaaacctggttatggac
acggtgttgatgtgccgggccgccctgatcgagcccgacccctatggccagaagaaaggc
gccaagcgctgtagcctggacgccctggccgcccgttacggtttggaggtcccggagcgg
cacaccgccctaggcgatgccatggccacggctttgatcctccagcgcctgctgccggaa
ttgtccgaggcggggtggaaaaccttgggtgatttggtgcaggtagccggggtgcaataa
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