Desulfoferula mesophila: FAK_13220
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Entry
FAK_13220 CDS
T09861
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAK_13220 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_13220 (uvrB)
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAK_13220 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAK_13220 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
BEQ14256
UniProt:
A0AAU9EUN6
LinkDB
All DBs
Position
1481797..1483845
Genome browser
AA seq
682 aa
AA seq
DB search
MSRESDFTSHWWRTAPSRADFELVSEFSPQGDQPRAIEELTHGLAEGIKHQVLLGVTGSG
KTFTMANVVANAGLPALVLAPNKTLAAQLYGEFKALFPHNAVEYFVSYYDYYQPEAYIPA
SDTYIEKDSSINERIDKMRHAATYALLSRQDVIIVASVSCIYGLGSPEVYADMIVYLEQG
QEADRDEILRKLVEMLYERNEYSFHRGTFRVRGDTVEIFPAYEEDRAVRISFFGDEVEEI
AFIDPLRGVALERAPRVTIFPASHYVTNETIRVQAMSAIRSELGERLAEFEAQGKLIEAQ
RIRERTLFDLEMMKELGYCHGIENYSRHLTGRAPGQAPPTLLDYFPKRWLLIVDESHISM
PQVRGMYFGDRSRKETLVEYGFRLPSALDNRPLNFGEFETHTDQIVYVSATPADYELTQA
EGVVVEQIIRPTGLMDPVIEVRPASGQVDDLLGELRLVVGRGERALVTTLTKRMAEELTE
YFDEMGLKVRYLHSDIDTIERVEIIRDLRKGVFDVLVGINLLREGLDLPEVSLVAILDAD
REGFLRSTRSLIQTTGRAARNVDGRVLLYADKVTDSMAQAMEETERRRQVQMEYNQEHHI
TPVSIKKAIGAMLPHELEADYTTVPLAETGPELEPEEIPQEIARLRQEMEQMAKDLRFEE
AALIRDQIKELQAQELAWKELA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggaaagcgacttcacctcccactggtggcgcaccgcgcccagccgggccgac
ttcgagctggtgagcgagttctccccccagggcgaccagccccgggccatcgaggagctt
acccacggcctggccgaggggatcaagcaccaggtgctcctgggggtcaccggcagcggc
aagaccttcaccatggccaacgtggtggccaacgccggcctgcccgccctggtgctggcc
cccaacaagaccctagccgcccagctctacggcgagttcaaggccctgttcccccacaac
gcggtggagtacttcgtctcctactacgactactaccagcccgaggcctacatcccggcc
agcgacacctacatcgaaaaggattcgtccatcaacgagcgcatcgacaagatgcgccac
gcggccacctatgccctgctctcccgccaggacgtgatcatcgtggccagtgtgtcgtgt
atctacggcctgggctcgcccgaggtctatgcggacatgatcgtctatttggagcagggc
caggaggcggaccgcgacgaaatcctgcgcaagctggtggagatgctctacgagcgcaac
gaatactcctttcaccggggcacctttcgggtgcgcggcgacacggtggagatcttcccc
gcctacgaggaagaccgggcggtgcgcatctcctttttcggcgacgaggtggaggagatc
gccttcatcgaccccctgcgcggggtggccctggagcgggccccccgggtgaccatcttc
ccggccagccactacgtgaccaacgagaccatccgggtgcaggccatgagcgccatccgc
agcgagttgggcgaacgcctggccgaattcgaggcccagggcaagctcatcgaggcccag
cgcatccgcgagcgcaccctgttcgacctggagatgatgaaggagctgggctactgccac
ggcatcgagaactactcccgccacctcaccggccgggctccgggccaggccccgcccacc
ctgctggactatttccccaagcgctggctgttgatcgtggacgagagccacatcagcatg
ccccaggtgcggggcatgtacttcggcgaccgctcccgcaaggagaccctggtggaatac
ggcttccgcttgcccagcgccctggacaaccggccgctgaactttggcgagttcgagacc
cacaccgaccagatcgtctacgtttcggccaccccggccgactacgagctgacccaggcc
gagggggtggtggtggaacagatcatccgccccaccgggctgatggaccccgtgatcgag
gtgcgccccgcctcgggccaggtggacgacctgttgggtgaactgcgcctggtggtggga
cggggcgagcgggccctggtgaccaccctgaccaagcgcatggccgaggagctcaccgaa
tatttcgacgagatgggcctcaaggtgcgctacctgcacagcgatatcgacaccatcgag
cgggtggagatcatccgcgacctgcgcaagggcgtgttcgacgtgctggtgggcatcaac
ctgttgcgcgagggcctggatttgcccgaggtgagcctggtggccatcctggacgccgac
cgcgagggcttcctgcgctccacccgctcgctgatccagaccacgggccgggcggcgcgc
aacgttgacggccgggttctgctctacgccgacaaggtgaccgattccatggcccaggcc
atggaggagaccgagcggcggcggcaggtgcagatggagtacaaccaagagcaccacatc
accccggtgagcatcaagaaggccatcggggccatgctgccccatgagctggaggccgac
tacaccacggtgcccctggccgaaaccggcccggagctggagcccgaggagataccccag
gagatcgcccgcctgcgccaggagatggagcagatggccaaggacctgcgcttcgaggag
gcggcgctgatccgcgaccagatcaaggagctgcaggcccaggagttggcctggaaggaa
ttggcatga
DBGET
integrated database retrieval system
