Desulfoferula mesophila: FAK_15350
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Entry
FAK_15350 CDS
T09861
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAK_15350 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_15350 (mutM)
Enzymes [BR:
dmp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FAK_15350 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FAK_15350 (mutM)
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAK_15350 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Peptidase_C70
Zn_ribbon_6
DUF1451
Motif
Other DBs
NCBI-ProteinID:
BEQ14469
UniProt:
A0AAU9EMP1
LinkDB
All DBs
Position
complement(1713575..1714399)
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AA seq
274 aa
AA seq
DB search
MPELPEVENVRRTMAPDLLGRTPSTVRVGLAKLVRPTPQALSAGIRGQSISQVDRHGKLL
MLRMSGHGTWAIHLGMTGQVIIADRRPDAKHIHVTVGFDDGGPRLYYRDPRQFGFMAWCP
DQAALDAGPLANMGPDALGIPLEVFLERVSGKGGKLKSVLLDQRVLAGVGNIYADESLHR
AGLHPLVAPKDLSQAQLTALHHHLQETLAEALAKGGSSISNFVDAHGRPGTFQHAHRVYQ
RGGQACNECGCEIERIVVAGRSTHFCPHCQKEHF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactacctgaagttgaaaacgtacgccgcaccatggcccccgatctgctcggg
cgcaccccaagcaccgtgcgggtgggtttggccaagctggtccggcccacgccccaggcc
ctgagcgccggtatccggggccagagcatatcccaggtggaccgccacggcaaactgctc
atgctgcgcatgtccggccacggcacctgggccatccacctgggcatgaccggccaggtg
atcatcgccgatcggcggcccgacgccaagcacatccacgtcaccgtgggctttgacgac
ggcggaccgcgcctgtattaccgcgacccccgccagttcggtttcatggcctggtgcccg
gatcaggccgccctggacgccggaccgctggccaacatgggccccgacgccctgggcatc
cccctggaggtgttcctggagcgcgtctcaggcaagggcggcaagctcaagagcgttctc
ctggaccagcgggtgctggccggggtgggcaatatctatgcggacgagtccctgcaccgg
gcgggcctgcatcccctggtcgcccccaaagacctgagccaggcccagttgaccgccctg
catcatcacctacaagaaaccctggccgaagccctggccaagggcggctcttccatcagc
aacttcgtggacgcccacggacggcccggcacctttcagcacgcccaccgggtgtaccag
cgcggcggacaggcctgcaacgagtgcggctgtgagatcgagcgcatcgtggtggccggg
cgctccacccacttttgcccccactgccagaaagagcatttttga
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