Desulfoferula mesophila: FAK_16840
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Entry
FAK_16840 CDS
T09861
Symbol
lcfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp00061
Fatty acid biosynthesis
dmp00071
Fatty acid degradation
dmp01100
Metabolic pathways
dmp01212
Fatty acid metabolism
dmp02024
Quorum sensing
dmp04146
Peroxisome
Module
dmp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FAK_16840 (lcfB)
00071 Fatty acid degradation
FAK_16840 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FAK_16840 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAK_16840 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmp01004
]
FAK_16840 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmp04147
]
FAK_16840 (lcfB)
Enzymes [BR:
dmp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FAK_16840 (lcfB)
Lipid biosynthesis proteins [BR:
dmp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FAK_16840 (lcfB)
Exosome [BR:
dmp04147
]
Exosomal proteins
Exosomal proteins of breast milk
FAK_16840 (lcfB)
Exosomal proteins of breast cancer cells
FAK_16840 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BEQ14618
UniProt:
A0AAU9EC00
LinkDB
All DBs
Position
complement(1864005..1865516)
Genome browser
AA seq
503 aa
AA seq
DB search
MGYALNIAKLLTDTAARVPGHVAVDFNGQTMTYGEFDQKTDALAWGLKQKGLEPGQVCVL
MMPNSLDWVICYYALAKLGAVVLPVNFLYRTQELKHIFSDSGARAFIGHGQYLEYAGAVL
AGMPQIDIRCATGPAAQGYTPLNEVPREQGPYPVHPAQDDDTWAIIYTSGTTGLAKGAML
THRNLSSNATTIADMRQTDPKVTSLGMLPLFHIYGQTSSLNASVYLGITLRLWEHFEPDE
TYAAIEEMDDTILIAVPTIFNRLAEMAVKRPLKRSSLHYCISGGASLPVEVIKRFEAGYS
TTIYEGYGLTECSPVCVENPYGKATKPGSIGLPIPGFQAKVVGEMDQEVPQGQVGELIVK
GPGVMKGYLNQPQATADTLRGGWLHTGDLARKDADDYIYIVDRKKEMIIRGGYNVYPREI
EEVLYQHPAVLEAAVVGQAHPDLGEEVAAMVVLREGAAATPDDIRAFVKERVAPYKYPRI
VRITDELPKTHTGKVLKRSIRLD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtggggtatgccttgaatatagccaagctgctgaccgacaccgccgcacgagtccccggc
cacgtcgccgtggacttcaacggccaaaccatgacctacggggaattcgaccaaaaaacc
gacgccctggcctggggcctgaagcaaaaggggctggagccgggccaggtctgcgtgctc
atgatgcccaactctttggactgggttatctgctactacgccctggccaaattgggcgcc
gtggttttgccggtgaatttcctctaccgcacccaggaactcaagcacatattcagcgac
tccggggctcgggcctttatcggccacggccaatatctggagtacgccggagcggtgctg
gcggggatgccccagatagacatccgctgcgccaccggaccggccgcccagggctatacg
cccctgaatgaggtgccccgggagcaaggcccctaccccgtgcacccggcccaggacgac
gacacctgggccatcatctacacctcgggcaccaccggcctggccaagggggccatgctc
acccaccgcaacctgtccagcaacgccaccaccatcgcggacatgcgccaaaccgatccc
aaggtgaccagcctgggcatgctgccccttttccacatctatggccagacctccagcctc
aatgcctcggtgtatttgggcatcaccctgcgcctgtgggagcacttcgagccggatgag
acctacgcggccatagaggagatggacgacaccatcctcatcgcggtgcccaccatcttc
aaccgcctggccgagatggccgtcaagcggcccctcaagcgctcctccctgcactattgc
atcagtggcggagcctcgttgcccgtggaggtgatcaagcgtttcgaggcgggctacagc
accaccatctacgagggctacggcctcaccgaatgctcgccggtgtgcgtggagaatccc
tatggcaaggccaccaagcccggctccatcggcctacccatccccggcttccaggccaag
gtggtgggcgagatggaccaggaggtcccccagggccaggtgggcgagctgatcgtcaag
gggccgggcgtgatgaagggctacctcaaccagccccaggccacggcggacaccctgcgc
ggcggctggctgcacaccggtgatctggcccgcaaggacgccgacgattacatctacatc
gtggaccgcaaaaaggagatgataatccggggcggctacaacgtgtacccccgggagatc
gaagaggtgctctaccagcacccggcggtgttggaggcggcggtggtgggtcaggcccac
ccggacctaggcgaggaggtggcggccatggtggtgctgcgcgagggagcggcggccacc
cccgatgatattcgggcctttgtgaaggagcgggtagcgccctacaaatacccccgcatc
gtgcgcatcaccgacgagctgcccaagacccacaccggcaaggtgctcaagcgttccatc
aggctcgactga
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