Desulfoferula mesophila: FAK_20020
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Entry
FAK_20020 CDS
T09861
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
dmp
Desulfoferula mesophila
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmp03021
]
FAK_20020
Transcription machinery [BR:
dmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FAK_20020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
GntR
HTH_11
DUF3306
Motif
Other DBs
NCBI-ProteinID:
BEQ14936
UniProt:
A0AAU9ELW8
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All DBs
Position
2205517..2206683
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AA seq
388 aa
AA seq
DB search
MSAKSTGKKKASAPRKKPQAKKAPAKPSKGKVSAKGEAPTSVTEPEILDPEEQTDSPRAG
GDLLEEDDLEFGSPGEPGDSEDETEEQPGLVPLAGGGPPAITNPLQRYLWEARQYPLLTR
EEEKELTQAYYDSGDPALAAKLVTSNLRLVVKIAMDHQRFWMRNLLDLIQEGNIGLMQAV
QKYDPFRGIKFSYYASFWIKAYILKFIMDNWRLVRLGTTQAQRKLFYNLRREQEKLQSQG
ITPGPKLLSTRLGVSEKDVIDMSQRLDSWELSLDAPVREDSEEAHQNFLTDEEQSDAEDE
LVNQELRKLFHDELMAVRDTLDEKERDILDRRLLAENPMTLNELGEEHGVSRERIRQLQV
RLMDKLKDRLSERIPNFEEQFAGLSEGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaatccacaggcaagaaaaaggcttctgcccctcggaaaaagccccaggct
aaaaaagcgccggccaagccgagcaagggcaaggtctctgccaagggcgaggctccgaca
agcgtgacggagccggaaatactggaccccgaggaacaaaccgattcgccccgggcgggg
ggagacctgctcgaagaggacgatctggagttcggctctcccggcgagccaggcgactcg
gaagatgaaacagaggagcagcccggcctggtgcccctggctggcggcggccccccggcc
atcaccaacccccttcagcgctacctgtgggaagcccgccagtatccccttttgaccagg
gaagaggaaaaggagctgacccaagcctattacgacagcggcgacccggccctggccgcc
aagttggtgaccagcaacctgcgcctggtggtcaagatcgccatggatcaccagcggttc
tggatgcgcaacctcctggacttgatccaggaaggcaacatcggccttatgcaggcggtg
caaaagtacgaccccttccggggcatcaagttttcctactacgccagcttttggatcaag
gcctacatcctcaagttcatcatggacaactggcgcctggtccgcctgggcaccacccag
gcccagcgcaagcttttctacaacctgcgccgcgagcaggaaaagcttcagtcccagggg
atcacccccggccccaaactgttgagcacccgcctgggagtatcggaaaaggacgtcatc
gacatgtcccagcgcctggacagctgggagctcagccttgacgcgccggtgcgcgaagac
tccgaagaggcgcaccagaatttcttgaccgacgaagagcagagcgatgccgaggacgag
ctggtcaaccaggaacttagaaaacttttccatgacgagttgatggccgtgcgcgatact
ttggatgaaaaggagcgcgacatattggaccgccgtctgttggcggaaaaccccatgacc
ctgaacgagctgggtgaggaacacggggtcagtcgcgagcgcatacgtcaattgcaagta
cgcttaatggataagctcaaggaccgtctcagtgaacgcatccccaattttgaagaacag
ttcgccggcctgtccgagggcgactga
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