KEGG   Desulfoferula mesophila: FAK_20180
Entry
FAK_20180         CDS       T09861                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
dmp  Desulfoferula mesophila
Pathway
dmp00300  Lysine biosynthesis
dmp00470  D-Amino acid metabolism
dmp01100  Metabolic pathways
dmp01110  Biosynthesis of secondary metabolites
dmp01120  Microbial metabolism in diverse environments
dmp01230  Biosynthesis of amino acids
Module
dmp_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dmp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    FAK_20180 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FAK_20180 (dapF)
Enzymes [BR:dmp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     FAK_20180 (dapF)
SSDB
Motif
Pfam: DAP_epimerase GYF_2 RE_BstXI
Other DBs
NCBI-ProteinID: BEQ14952
UniProt: A0AAU9F312
LinkDB
Position
2224428..2225333
AA seq 301 aa
MDSAQIKRLEALAGIDLVKMTGTGNDFILVDNRKAGVTRELMSDLALGLCQRRRSVGADG
MIFLEPSNRVDPVRGTVDWRWHFFNADGSAAEMCGNGGRCAARYAHDVGLAGEEMVFDTT
AGPIRAWILDSGVKLEMIHPFGAYQGVELEVDGGMVKMDGVNTGVPHAVIAVEDIEAAPV
VPVGRKVRFAPHFAPAGTNVNFACAKDGELVVRTYERGVEDETLACGTGAVASALMLGPA
MGLKSPVRVKVRSGEELKVHFDKQGEDFGPVFLEGAAHYVYSGKLNAEALAWLHTQEDSP
C
NT seq 906 nt   +upstreamnt  +downstreamnt
atggattcggcacaaataaagcgtctggaggccttggcggggatcgatctggtcaagatg
accggcacgggcaacgacttcattctggtggacaaccgcaaagccggggtgacccgggag
ttgatgtccgatctggccctggggctttgccaacgtcggcgttcggtgggggccgacggc
atgatctttctggagcccagcaaccgggtggaccctgtgcggggcaccgtggattggcgc
tggcatttcttcaacgccgacggctcggcggccgagatgtgcggcaacggcgggcgctgc
gccgcccgttatgcccacgacgtgggcctggccggcgaggagatggtgttcgacaccacc
gccggccccatacgcgcctggattttggattcgggcgtaaagctggagatgatccatccc
tttggggcctaccagggggtggagcttgaggtggacggcgggatggtgaagatggacggc
gttaacaccggggtgccccacgcggtgatcgcggtggaggatatcgaggcggcacccgtg
gtgccggtgggccgcaaggtgcgctttgccccccacttcgccccggccgggaccaatgtg
aacttcgcctgcgccaaggacggcgagttggtggttcgcacttacgaaagaggagtggag
gacgagaccctggcttgtggtaccggcgcggtggcttccgccttgatgctgggcccggcc
atgggcctgaaatcgccggttagggtcaaggttcgcagcggcgaggaattgaaagttcac
tttgataagcagggcgaggacttcggcccggtattcctggagggggcggcgcattacgtc
tactccggcaagctcaacgccgaagccctggcttggttacatactcaggaggattctcca
tgttaa

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