Desulfoferula mesophila: FAK_20460
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Entry
FAK_20460 CDS
T09861
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FAK_20460 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_20460 (recD2)
Enzymes [BR:
dmp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FAK_20460 (recD2)
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FAK_20460 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
HHH
AAA_11
AAA_22
HHH_3
AAA
AAA_28
NTPase_1
DUF3701
MeaB
nSTAND3
AAA_25
Helicase_RecD
AAA_29
NPHP3_N
AAA_16
PIF1
MobB
cobW
Motif
Other DBs
NCBI-ProteinID:
BEQ14980
UniProt:
A0AAU9ETD6
LinkDB
All DBs
Position
complement(2250340..2252496)
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AA seq
718 aa
AA seq
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MKAPSQVRLKGRVKRITFANPENGYTVAKVEIEGRLGLTTLVGRMPGLTEGQEVIISGKE
STHPKFGPQIEVEECRMEQPSDAQGVQRYLASGLIKGVGPVLAERIVDTLGTGAVDIILE
EPRRLAEVPGVGPKRAQVISEAVAAHGALRDLMVFLQTHGVSGSTALRIYRRYGAGALGV
VQNKPHRLASDVRGIGFATADAIAARLGIAADHPERLQAGLLWILTKARDEGHVYLPYEE
LLERTAAELRVERALLGPAFARLHSEQEIVAEDTADGQRAVYLSGQHAMETLAARELARI
ARQEGLLTPERAAKAVEWVAGQLAVKPSPGQAAALTNLLEAGLGVLTGGPGTGKTTLVKA
VITIARRMGLSIALAAPTGRAAKRLAQAGGREALTLHRLLEYSPKENRFLRGPDKPLEHG
LIVVDESSMIDIWLGAHLAAAVGPTSRLLLVGDADQLPPVGPGLFFRQIMDSGAAKVARL
TEIFRQDESGLIVANAHRILHGQMPRLPQGEGEGDFFFIEQKDPARAAEMIRDLVTQRLP
RSFGLDPERDIQVLAPMHKGNLGCAHLNALLRQALNPRAAGRPGLAPGDRVMQVRNNYDL
DVFNGDLGLALREDDEGLVVEMEHGPVSYAPADLDDLTLAYAITVHKSQGSEYPAVVIAL
AGEHYIMLNRPLLYTAVTRGKQLVVIVGQHKALKRAVEHAQPIHRYAALDTKIRKYLN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggctcccagccaggtgcggctcaagggccgggtgaagcgcatcacctttgccaac
ccggaaaacggctacaccgtggccaaggtggagatcgagggccgtctgggactgaccacc
ctggtggggcgcatgcccggtctcaccgagggccaggaggtcatcatcagcggcaaggag
tccacccaccccaagttcggcccccagatcgaggtggaggaatgccgcatggagcagccc
tccgacgcccagggggtgcagcgctacctggcctcgggcctcatcaagggggtgggtccg
gtgctggccgagcgcatcgtggataccctgggaaccggggcggtggacatcatcctggaa
gagccgcgccgcctggccgaggtgcccggcgtggggcccaagcgagcccaggtcatctcc
gaggcggtggccgcccacggggcgctacgcgacctcatggtctttttgcagacccacggc
gtgtccggctccacggccctgcgcatctaccgccgctacggagccggtgccctgggggtg
gtgcagaacaagccccatcgtttggcctcggacgtgcggggcatcggcttcgccaccgcc
gacgccatcgccgcccgcctgggcatcgccgccgaccatcccgagcgcttgcaggccggg
ctgctgtggatacttaccaaggcccgcgacgagggccacgtgtatttgccctacgaggag
ctgctggagcgcaccgccgccgagcttcgggtggagcgggcgttgctgggcccggcgttt
gcccggctgcacagcgagcaggagatcgtggccgaagacacggccgacggccagcgggcg
gtgtacctcagcggccagcacgccatggaaaccctggccgcccgggagctggcgcgcatc
gcccgccaggaaggcttgctcactcccgagcgggcggccaaggcggtggagtgggtggcc
gggcagctggccgtgaagccctcgcccggtcaggccgcggccctcaccaacctgctggaa
gcgggcctgggggtgctcaccggtgggccgggcaccggcaagaccaccctggtcaaggcg
gtcatcaccatcgcccggcgcatgggcctgagcatcgccctggccgcgcccaccggccgg
gcggccaagcgcctggcccaggccgggggccgggaggcccttaccctgcaccgcctgctg
gagtacagccccaaggagaatcgctttttgcgcggtccggacaagcccctggagcacggg
ctcatagtggtggacgagtcctccatgatcgacatctggctgggagcccatctggccgcc
gcggtggggccaaccagccgcctgttgctggtgggcgacgcggaccaactgcccccggtg
gggccgggcctgttcttccgccagatcatggactccggcgcggccaaggtggcccggctc
accgagatcttccgccaggatgagagcgggcttatcgtggccaacgcccaccgcatcctg
cacgggcagatgccccgcctgcctcagggggaaggggagggcgactttttcttcatcgaa
caaaaagacccggcccgggcggcggagatgatccgcgacctggtgacccagcgcctgccc
cggagcttcggcctggacccggagcgcgacattcaggtcttggcccccatgcacaagggc
aatctgggctgcgcccacctcaacgccctgctgcgccaggccctgaacccccgcgccgcc
ggacggcccggcctggctccgggcgaccgggtcatgcaggtgcgcaacaattacgacctg
gacgtgttcaacggcgacctgggcctggcccttcgagaagacgatgagggcctggtggtg
gagatggagcatgggccggtgagctacgccccggccgacctggatgacctgaccctggcc
tacgccatcaccgtgcacaagagccagggcagcgagtacccggcggtggtcatcgcgctg
gccggcgagcactacatcatgctcaaccggccgctgctctatacggcggtgacccggggc
aagcaactggtggtcatcgtggggcagcacaaggccctgaaacgggcggtggagcacgcc
caacccatccaccgctacgcggcgctggataccaagatcagaaaatatttgaattga
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