Desulfoferula mesophila: FAK_20880
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Entry
FAK_20880 CDS
T09861
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp00860
Porphyrin metabolism
dmp01100
Metabolic pathways
dmp01240
Biosynthesis of cofactors
Module
dmp_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
FAK_20880 (cobD)
Enzymes [BR:
dmp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
FAK_20880 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
DUF6338
GpP_4th
Motif
Other DBs
NCBI-ProteinID:
BEQ15022
UniProt:
A0AAU9EER8
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All DBs
Position
2297629..2298588
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AA seq
319 aa
AA seq
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MGPAWIIALAMIFDAEIGDPPAWPHLVRYMGLAISRLEGVLRSPASTPFGLRLAGVALVL
LVVGGFSFTTWLALYLLEAITPLLAWLMALVMCWQCLSAGQLWREANVVLRALERDLGEA
RNRLSMIVGRETRNLDEQGVRRAVVETVAENFNDGVVAPLFYMALLGPVGAVAYKAVNTL
DSMVGYRDERYLHLGWAAARLDDLAGWLPARLSALLLAAAAPLLGLGASEAWRIARRDHA
AHKSPNSAWPEAAMAGALGVRLGGPNHYHGVLVDKPWINPGGGPTGEAQARQCVQLMQLA
SVLAAGGAVFLAWGLGWWL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgggccccgcctggataatcgccttggccatgatttttgacgccgagatcggtgacccg
cctgcctggcctcatttggttcgttacatgggtctcgccatctcccgcctggaaggggtt
ttgcgctccccggcttctaccccttttgggctgcgtttggccggcgtggctttggttttg
ttggtggtggggggattctcctttaccacctggctggcgctgtacctgttagaggccatt
acccctcttttagcctggctcatggccctggtgatgtgctggcagtgcctttccgccggt
caattgtggcgggaggccaacgtggtgctgagggcgcttgaaagggacctgggtgaggcc
cgaaaccgtctatccatgatcgtgggccgcgagacccgaaaccttgacgaacagggagtg
cgccgggcggtggtggagaccgtggctgaaaacttcaacgacggggtggtggcccccttg
ttttacatggctcttttgggtcccgtgggggcggtggcctacaaggcggtgaacaccctg
gactccatggtgggttaccgcgatgagcgctatctccatctgggctgggccgcggcccgc
ctggacgatttggccggttggctgcccgcccgccttagcgccctgctcctggcggcggcc
gcccccttgctggggctcggcgcctccgaggcctggcgcatcgcccgcagggaccacgcg
gcccacaaaagccccaactcggcctggcccgaggcggccatggccggggccctgggcgtg
cgcctgggaggccccaaccactatcacggcgtgttggtggacaagccgtggatcaacccc
ggcggcggacccaccggggaagcccaggcccgccaatgcgtgcagttgatgcagctggcc
agcgttttggccgccgggggggcggttttcctggcctggggcctgggctggtggctgtga
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