Desulfoferula mesophila: FAK_25310
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Entry
FAK_25310 CDS
T09861
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03030
DNA replication
dmp03430
Mismatch repair
dmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAK_25310 (dnaE)
03430 Mismatch repair
FAK_25310 (dnaE)
03440 Homologous recombination
FAK_25310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmp03032
]
FAK_25310 (dnaE)
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_25310 (dnaE)
Enzymes [BR:
dmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAK_25310 (dnaE)
DNA replication proteins [BR:
dmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAK_25310 (dnaE)
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAK_25310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
BEQ15465
UniProt:
A0AAU9EFA7
LinkDB
All DBs
Position
2756243..2759704
Genome browser
AA seq
1153 aa
AA seq
DB search
MTPPFVHLHTHTQYSLLDGAIRLPDLMKRAKELGMDTVAMTDHGNMFGAIHFQQKAKDAG
LKPIIGCEVYVAPGDRRDKEHRPGQIVANHLVLLAKDLIGYQNLVRLVSAGFTEGFYYKP
RIDMELLREHHEGLIAMSACLQGKVPQLMLAGRDDLAEAAAREFAQIMGENNFFIELQDA
GLPEQKKVNPGLIDLARRLGLGLVATNDCHYLRREDHEAHDVLLCIQTGKTVDAADRMKL
SGEIYFKSPEEMADLFPELPETISNCADIAARCNMEIPLGQLRFPVFHLDNGETAEDRLR
KVSWEGLDKRLKEIEQRGLAFDRQEYKDRLEYELDVLCKMGFPGYFLVVADFINWAKDHG
IPVGPGRGSAAGSLVAYSMRITDLDPIRYKLIFERFLNIERKSMPDIDVDFCYNRRGEVI
EYVTQKYGADHVSQIITYGTMQARAVLRDVGRAMNIPYNEVDQIAKLVPAKLGISLDEAL
DSEPRLVERMKADPQVQKLLDIARLLEGLPRHASTHAAGVVIGDVPLDQVVPLYRGTGEE
NVTQFDMKCVEKAGLIKFDFLGLKTLTVIALAVEMVRANHDPDFAIEDIDLEDRPTFELL
SRGDTTGVFQLESSGMKELLAKLRPEVFEDVIALVALYRPGPLESGMVDDFVARKHGTKK
VSYDLPQLEPVLKETYGVIVYQEQVMEIAMRLAGYSLGEGDILRRAMGKKDPQVMSQQKE
RFLEGALEKGIPREKSGALFDLIEKFAGYGFNKSHSAAYALIAYQTAFLKAHYPLEFMAA
LLTSEVNDTDKVMAHIGECRERGLTVLPPDINHSGIDFTVADNAIRFGLAAVKNVGRGAV
EAIIAAREQGDEFSGLHDLCERVDLRKVNRRVLESLVKCGAFDSTGAHRAQLMAVLDEAL
EHGQKMRRDSDAGQSSIFELMSGGAEAAAPELPNVPLWSESDRLSYEKEAIGFYITGHPL
SDYQDEIKRLGTLDTVSLKAASDGMSITMAGVAAKIKEKITKKGDRMAFVDMEDLKGTVE
VICFPDCYAKAADLLSGDEPVLVKGTVDKDERGIKIKATAVEPLTGAAQARTSRLRLRLE
ATGLTREKMVLLRQALAKHPGACRVSLHLSVPGKGEAVLALPGQYRVEAAPALFDQVNEL
FGHPVVEPVLSGD
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcccttcgtccatctgcacactcacacccaatacagcctgctggacggggcc
atccgcctgcccgacctcatgaagcgagccaaggaactgggcatggacaccgtggccatg
accgaccacggcaacatgttcggggccatccacttccagcaaaaggccaaggacgcgggg
ctcaagcccatcatcggctgcgaggtctacgtggcccccggcgaccgtagggacaaggag
caccgccccggccagatcgtcgccaaccacctggtgctgttggccaaggacctcattggc
taccagaacctggtgcgcctggtcagcgccgggttcaccgagggcttctactacaagccg
cgcatcgacatggagctgttgcgcgagcaccacgaggggctcatcgccatgagcgcctgc
ctgcagggcaaggtgccccagctcatgctggccgggcgcgacgacctggccgaggccgcg
gcccgcgagttcgcccaaatcatgggcgagaacaactttttcatcgagctgcaggacgcc
gggctgcccgagcagaagaaggtcaaccccggcctcatcgacctggcccggcgcctgggt
ctgggcctggtggccaccaacgattgccactacctcaggcgcgaagaccacgaggcccac
gacgtgctcctgtgcatccagaccggcaagacggtggacgcggccgaccgcatgaagctc
tcgggcgagatctacttcaagtcgcccgaggagatggccgacctgttccccgagctgccc
gagaccatctccaactgcgcggacatcgccgcccgctgcaacatggagatacccctgggc
caactccgcttcccggtgttccacctggacaacggggagaccgccgaggaccggctgcgc
aaggtctcctgggagggcctggacaagcgcctcaaggagatcgaacagcggggcctggcc
tttgaccgccaggagtacaaggaccgcctggaatacgagctggacgtgctgtgcaagatg
ggcttccccggctatttcctggtggtggccgacttcatcaactgggccaaggaccacggc
atccccgtgggcccggggcgcggttcggcggccggcagcctggtggcctattccatgcgc
atcaccgacctggaccccatccgctacaagctgatcttcgagcgcttcctgaacatcgag
cgcaagtccatgcccgacatcgacgtggacttttgctacaaccgccggggcgaggtgatc
gagtacgtcacccagaagtacggggcggaccacgtctcccagatcatcacctacgggacc
atgcaggcccgggcggtgctgcgcgacgtgggccgggccatgaacatcccctacaacgag
gtggaccagatcgccaagttggtgcccgccaagctgggcatctccctggacgaggccctg
gactccgagccccgcctggtggagcgcatgaaggccgacccccaggtgcaaaagctcctg
gacatcgcccgcctgttggagggcctgccccgccacgcctccacccatgccgccggggtg
gtcatcggcgacgtgcccctggatcaggtggtgcccctctatcgcggcaccggcgaggaa
aacgtcacccagttcgacatgaagtgcgtggaaaaggccgggctgatcaagttcgacttt
ctgggcctcaagaccctgacggtcatcgccctggccgtggagatggtgcgggccaaccac
gatcccgacttcgccatcgaggacatcgacctggaggaccggcccacctttgagctgctt
tcccggggcgacaccaccggcgtgttccagttggagtcatcgggcatgaaggagctgttg
gccaagctcaggcccgaggtgttcgaggacgtcatcgccctggtggccctgtaccggccc
ggccccctggagtcgggcatggtggacgacttcgtggcccgcaagcacggcaccaaaaag
gtgtcctacgacctgccccagctggagccggtgctcaaggagacctacggggtcatcgtg
taccaggagcaggtcatggagatcgccatgcgcctggcgggctactccctgggcgagggc
gacatcctgcgccgggccatgggcaaaaaagacccccaggtcatgagccagcaaaaggag
cgctttctggagggcgccctggaaaagggcataccccgcgaaaagtcgggcgctctgttc
gacctcatcgaaaaattcgcgggctacggcttcaacaagtcccactccgccgcctatgcc
ctcatcgcctatcagaccgccttcctcaaggcccactacccgctggagttcatggccgcg
ctgctcaccagcgaggtcaacgacaccgacaaggtcatggcccatatcggcgagtgccgc
gagcgcggcctcaccgtgctgccaccggacatcaaccactcgggcatcgacttcaccgtg
gccgacaacgccatccgcttcggcctggccgcggtaaagaacgtggggcgcggcgcggtg
gaggccatcatcgccgctcgggaacaaggcgacgagttcagcggcctgcacgacctgtgc
gagcgggtggatttgcgcaaggtcaaccgccgagtattggagagcctggtcaagtgcggg
gcctttgacagcaccggagcccaccgggcccaactgatggcggtattggacgaggccctg
gagcatggccagaagatgcgccgcgacagcgacgcgggccaatcctccatcttcgagctc
atgagcgggggggccgaggccgccgcgccggagctacccaacgtacccctgtggagcgag
tccgaccgcctgtcctacgagaaggaagccatcggcttttacatcaccggccacccgctc
agcgactatcaggacgagatcaagcgtctgggcaccctggacacggtgagcctcaaggcg
gccagcgacggcatgagcatcaccatggccggggtggcggccaagataaaagagaagatc
accaaaaagggcgatcgcatggccttcgtggacatggaggacctcaagggaaccgtggag
gtgatctgcttcccggactgctacgccaaggccgcggatctcctgagcggcgacgagccg
gtgctggtcaagggcacggtggacaaggacgagcgaggcatcaagatcaaggccaccgcg
gtggagcccctaaccggggcggcccaggcccgcaccagccgcctgcgcctgcgcctggag
gccaccggcctcacccgcgagaagatggtgctgttgcgccaggccctggccaagcacccc
ggcgcctgccgggtgtcgctgcatctcagcgtacccggcaagggcgaggcggtgttggcc
ctgcccggccaataccgggtggaggcggccccggccctgttcgaccaggtcaacgagctg
ttcggccacccggtggtggagccggtgttgtcgggggattag
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