Desulfoferula mesophila: FAK_32710
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Entry
FAK_32710 CDS
T09861
Symbol
deaD-2
Name
(GenBank) DEAD/DEAH box family ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAK_32710 (deaD-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmp03019
]
FAK_32710 (deaD-2)
Enzymes [BR:
dmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FAK_32710 (deaD-2)
Messenger RNA biogenesis [BR:
dmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAK_32710 (deaD-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BEQ16205
UniProt:
A0AAU9EJN4
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All DBs
Position
3514884..3516101
Genome browser
AA seq
405 aa
AA seq
DB search
MSIESFEEFGLSPQINRALLSLGHQTPTPVQAAAIPAVLEGRDLLGCSQTGTGKTGAFAL
PILQTLSQSGGRPRRGSARCLVLTPTRELALQIADSFKGYGRNLRLSLAAVYGGVGQMPQ
VRACARGIDVLVATPGRLLDLIRQGHLSLGNLEILVLDEADRMLDMGFLPDIKRVLAMIP
DRRQTLFFSATMPPAIAQLAGSILDRPVKVQITPSAVPVERIAQRVMFATQSEKRALLGQ
VLGGVDVDRVLVFTRTKHGADRVVRQLAQGGVSAEGIHGNKSQNARQRALANFRSGATRV
LVATDIASRGIDVEGVTHVINYDLPNEPECYVHRIGRTARAGADGVAISFCSAEERSCLR
AIERLIKRSVPVQGPNAPKDGGGSKKYGKSSRRRPRRTGSARAAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgaatcattcgaagaattcggattgagcccccagatcaaccgcgctctgctc
tccctggggcaccaaacccccaccccggtgcaggccgcggccatcccggcggtgctcgag
ggccgcgatctgttgggctgttcgcagaccggcaccggcaagaccggcgccttcgccctg
cccatcctacagacgctgtcccagagcggggggcgcccccgccggggctcggcccgctgc
ctggtcctgacccccacccgcgagttggccctgcagatcgccgacagtttcaagggctac
ggccgcaatctccggctttccctggcggcggtctatggcggcgtggggcagatgccccag
gtgcgggcctgcgcccggggaatcgacgtactagtggccacccccggccgcttgctggac
ctgattcgtcagggccacctgtctctgggcaacctggagatattggtgctcgacgaggcc
gaccgcatgctggacatgggctttttgcccgacattaagcgggtgttggccatgataccc
gaccgacgccagactcttttcttttccgccaccatgcccccggccatcgcccaattggcg
ggcagcatcctggaccgtcccgtcaaggtgcagatcacgccttcggcggtgccggtggag
cgcatcgcccagcgggtcatgttcgccacccagagcgaaaagcgcgccctgctgggccag
gtgctcggcggcgtggacgtcgatcgcgtgttggtgttcacccgcaccaaacacggcgcc
gacagggttgtgcgccagctggcccagggcggggtgagcgccgagggcatccacggcaac
aaatcgcaaaacgcccgccagcgggccctggccaacttccgcagcggcgccacgcgggtg
ttggtggccaccgacatcgcctcccggggcatcgacgttgaaggcgtcacccatgtcatc
aactatgacctgcccaacgagcccgagtgctacgtgcaccgcatcggacgcacggcccgc
gccggggcggatggggtggccatatccttttgcagcgccgaggaacgctcctgcctgcgc
gccatagagcgcctcatcaagcgctccgtgccggtgcagggcccgaacgccccgaaagat
ggcggcggctccaaaaaatacggcaagagctcccggcgccgtccgcgccgtacaggctcg
gctcgggccgcggcctaa
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