Desulfoferula mesophila: FAK_32960
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Entry
FAK_32960 CDS
T09861
Name
(GenBank) outer membrane autotransporter barrel domain-containing protein
Organism
dmp
Desulfoferula mesophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
DUF3575
Motif
Other DBs
NCBI-ProteinID:
BEQ16230
UniProt:
A0AAU9EHJ2
LinkDB
All DBs
Position
3549871..3556221
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AA seq
2116 aa
AA seq
DB search
MPSRVKLVSTVLFLFLLMFSPSASFADNYEVDSTVSSVVGTENADTVNVNTPSGVVTNQV
QTRGGDDTINNYNQVGSYIDGGDGADTITNSGSVGAYVTGGVNSNGVTSGGNTISNTSTG
TVASDVVGSDNRGTSSSGGENQISNAGSISGNVFGSKNTGADSSGGTNTIDNQGSVGGAI
TGSHNQSAGTSGGDNTVNNSGTVSSSVYGSRNSGLGAEGGGNEVTNEETGQINGNMIGSD
NTNTGNIGGGNTVSNLGTVNMTVAGSSNFGENSSGGGNQVSNGSTTVTGSAATVKDALMG
SLNQGSGASGGSNTVDNYGVVNSSTYGSRNAGQDSSGGDNTVTNHEGGTINGHLVGTENS
GSGSAGGGNTLGNSGTVNQFVYGSLNSGQDSLGGTNTINNNSTGLVKGDLIGTQNQGSGS
SGGENQITNDGSIQGSVYGNLNSGYDSSGGFNEIANNSGATVTGDVLGADNRGELSSGGD
NQITNAGTISGNVYGSKNTGPGSSGENNTIANKTGGTVKGSIYGSYNDAQGVSGGANDIG
NTGSVEGSIVGSMNTAQGANGGSNTINNGTLGVGTVDTDVIGSVNQTQDTSGGSNIINNA
GTVGGKMVGSLNSGFDSVGGNNTITNRAFGTVEGDVVGSLNMGNGSSGGSNTITNQTLAT
VKGNVIGAQNSEAGASGGSNTITNQGTVEGDVIGSENSNANTSGGSNTINNAGEVQGTII
GSRNSGNGSTSTPNTINNQLGGSAGYIVGTDNVASNVSGGGNTINNRGTVTNDMIGSRNS
GEGASGGSNTITNRTFSTVEGDVIGSLNSGTASSGGSNTITNQTLGTVEGDVIGSLNSGE
NSSGGGNTINNAGEVQGTIIGSRNSGNGSTSTPNTINNQLGGSAGYIVGTDNVASNVSGG
GNTINNWSTVTNDMIGSRNSGEGASGGSNTLTNRTFSTVEGDVIGSLNSGENSSGGSNTI
NNQTLGTVEGEVIGSVNIGENSSGGSNTIRNQTGGTVKGSIYGSYNYAQEVSGGANDIGN
TGSVEGSIVGSMNTAQGANGGSNTINNGTLGIVEGDVVGSVNSGTASNGGSNTINNGTLG
IVEGDVVGSINSGTASNGGSNTITNEGLAVVEGDVIGSLNSGENSSGGSNTINNYGAALS
DVVGSRNSGDDATSGSNILTNGNGTDPATIAGNLIGTQNSGVGSSGGSNQITNNSIVLGN
IIGSENSGDGASGGDNTINNDGVATLDIAGSNNAGTGSSGGDNTINHTGAAAYVYGSMNS
GEDSSGGGNTINAKSSVLFGLYGSGNSGLNSEGGSNTIITSEDFAATATGSLNNGTGSSG
GENTLTNEGTNTVGLIGSHNSGDVSSGGSNIIANKATVTGDIQGSLSDGAGSSGGENRIT
NTGTVEGNIYGSVNTGVGSSGGSNIIANKATVTGDIQGSLSDGAGSSGGENRITNTGTVE
GNIYGSVNTGVGSSGGGNTILNKGTVGGSIYGSYNTGAGSTATGNYIYNYGTVLDSIYAG
IGDDTVYLASTSAVTNWVDGQAGYDTLVFINGGTFTGTGVAQFINFERAEFDYPGTTTIA
GVLNLSDMDVYINDGTVLVNGTFISDTLTNYATLGGSGRINADVINYGVISPGNSIGTLA
INGNLTFMNGSIYLLEIGANGATDLVEVSGKTVINNAYIHTYLPRALYADGTSWRILTSS
GGVTGNFAGIVGQPNSVVLSLASVNQGDAIDLVLNRKSYGYFADTPSGAQVGRGMDKLVP
VATGNMESLLLSMDWDMNASQINNVLTQLNPEMYTAFTTASFATGSLFSDTMSRRLEEMR
QRKALNLDTQKSATGPVQLAAAETVPMAGLGQGASCDNTGWTLWGRAMGLWNNQDAEGGY
LGFRQSGGGAALGADGLLNSWFRLGVAVGATRTDLSFSRANDSGDQEAFHAGLYGQATFG
ETYLRAALSYARLSNDSSRQVTLGSIDDQAKGDFDGNLFGAGLEAGYDWRFAPDWLLEPM
ASLQYQRVQQDGFTESGIGWLGYNIENDDDDSFVSRLGVRLTRLFKTDNWELLPRVGLAW
LHQFSDSNPSLTASFIDYGAQSFSVEGAPPAGDLAEFEAGFTASTNYCVSFFTDYRISYA
DDYQEQILSVGLQYQF
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtagggtcaagctggttagcacagttctattcctattcctcttaatgttttct
ccctctgcttcttttgcagacaactacgaagttgacagcactgtaagcagcgttgtcggc
acggaaaatgccgacaccgtaaacgtaaacacgccatcaggggtggtcaccaaccaggtg
caaaccaggggtggtgacgacactatcaacaactataatcaagtcggcagctacatagac
ggtggcgacggcgccgacacgatcaccaactcgggcagcgtaggtgcctatgtcaccggc
ggcgtcaacagcaatggcgtgaccagcggcggcaacaccatcagcaacacctccaccggc
accgtggccagcgacgtggtcggttcggacaaccgcgggacttccagcagcggcggcgaa
aaccagatatccaacgccggcagcatctccggcaacgtatttggcagcaagaacaccggc
gccgattccagcggcggaaccaacaccatcgacaaccagggcagcgtcggcggcgccatc
accggctcgcacaaccaaagcgcgggaaccagcggtggcgataacacggtgaacaactcc
ggcaccgtctcctccagcgtttacggcagccgcaactccggcctgggcgccgaaggcggc
ggcaacgaggttaccaacgaggaaaccggccagatcaacggcaacatgatcggctcggac
aacaccaacaccggcaacatcggcggcggcaacaccgtcagcaacctcggcaccgtgaac
atgacggtggcgggcagcagcaacttcggcgagaattccagcggcggcggcaaccaggta
agcaacggctccaccaccgttaccggttcggcggccaccgtcaaagacgccctgatgggc
tcgctgaaccaggggagcggcgccagcggcggcagcaacaccgtggacaactacggcgtg
gtgaattccagcacctacggcagccgcaacgcgggccaggacagcagcggcggcgacaac
accgtcaccaaccatgagggcggcaccatcaacggccatctggtgggcacggaaaacagc
ggttccggaagcgcgggcggcgggaacaccctaggcaactccggtacggtgaaccagttc
gtctacggcagcctcaactcggggcaggactccctcggcggcaccaacaccatcaacaac
aacagcaccggcctggtcaagggcgacctgatcggcacccagaaccagggctccggcagc
agcggcggcgagaaccagatcaccaacgacggcagcatccagggcagcgtctacggcaac
ctcaactccggctacgacagcagcggcggcttcaacgagatcgccaacaactccggcgcc
accgtgaccggcgacgtccttggcgcggacaaccgcggcgagctcagcagcggcggcgac
aaccagataaccaacgccggcaccatctcgggcaacgtatacggcagcaagaacaccggc
cccggctccagcggcgaaaacaacaccatcgccaacaagaccggcggtaccgtcaagggc
agcatctacggctcttacaacgacgcccagggagtcagcggcggagccaacgatataggc
aacaccggcagcgtcgagggcagcatcgtgggcagtatgaacacggcccagggcgccaac
ggcggatccaacaccatcaacaacggcaccctaggcgtcgggaccgtggataccgatgtc
atcggctcggtcaaccagacccaggacaccagcggcggctccaacatcatcaataacgcc
ggcaccgtgggcggcaagatggtcggcagcctcaactccggcttcgacagcgtaggcggc
aacaacaccatcaccaaccgggccttcggcacggtggaaggcgatgtggtgggctcgctg
aacatgggcaacggttccagcggcggcagcaacaccatcaccaaccagaccctggccacc
gtcaagggcaacgtgatcggcgcgcaaaacagcgaggccggggccagcggcggctccaac
accatcaccaaccagggcaccgtcgaaggcgacgtgatcggctccgaaaacagcaatgcc
aacaccagcggcggctccaacaccatcaacaacgccggcgaggtgcagggcaccatcatc
ggcagccgcaactcgggtaacggctccaccagcacccccaacaccatcaacaatcagctc
ggcggcagcgcgggctacatcgtgggcacggacaacgtcgcttccaacgtgagcggcggc
ggaaacaccatcaacaaccggggcaccgtcaccaacgacatgatcggcagccgcaactcg
ggcgagggcgccagcggcggatccaacaccatcaccaaccggaccttcagcaccgtcgaa
ggcgacgtgatcggctcgctcaacagcggtacggccagcagcggcggctccaacaccatc
accaaccaaaccctgggcaccgtcgaaggcgacgtgatcggctcgctcaacagcggcgaa
aactccagcggcggcggcaacaccatcaacaacgccggcgaggtgcagggcaccatcatc
ggcagccgcaactcgggtaacggctccaccagcacccccaacaccatcaacaatcagctc
ggcggcagcgcgggctacatcgtgggcacggacaacgtcgcttccaacgtgagcggcggc
ggaaacaccatcaacaactggagcaccgtcaccaacgacatgatcggcagccgcaactcg
ggcgagggcgccagcggcggatccaacaccctcaccaaccggaccttcagcaccgtcgaa
ggcgacgtgatcggctcgctcaacagcggcgaaaactccagcggcggcagcaacaccatc
aacaaccaaaccctgggcaccgtcgaaggcgaggtgatcggctccgtcaacatcggcgaa
aactccagcggcggatccaacaccatacgcaaccagaccggcggtaccgtcaagggcagc
atctacggctcttacaactacgcccaggaagtcagcggcggcgccaacgatataggcaac
accggcagcgtcgagggcagcatcgtgggcagtatgaacacggcccagggcgccaacggc
ggctccaacaccattaacaacgggaccctgggcatcgtcgaaggcgacgtggtcggctcc
gtcaacagcggtacggccagcaacggcggctccaacaccattaacaacgggaccctgggc
atcgtcgaaggcgacgtggtcggctccatcaacagcggtacggccagcaacggcggctcc
aacaccatcaccaacgagggcttggccgtcgtcgaaggcgatgtgatcggctcgctcaac
agcggcgaaaactccagcggcggcagcaacaccatcaacaactatggcgccgcgctgagc
gacgtggtaggcagccgcaactccggtgatgacgccaccagcggctccaacatcctgacc
aacgggaatggaacggatccggccacgatcgccgggaacttgatcggcacccagaacagc
ggcgtcggctccagcggcggcagcaaccagataaccaacaacagcatcgtcctgggcaac
atcatcggcagcgaaaactccggtgacggagccagcggcggcgacaacaccatcaacaac
gatggcgtggccaccctagacatcgccggatcgaacaacgccggcaccggcagcagcggc
ggcgacaataccatcaaccacaccggcgcggccgcctatgtctacggctcgatgaactcg
ggcgaagacagcagcggcggcggaaacaccatcaacgccaaaagcagcgtcttgttcggg
ctctacggcagcggcaactccggcctgaacagcgagggcggctccaacaccatcatcacc
tcggaagatttcgcggccacggccaccggcagcctcaacaacggcaccggcagcagcggc
ggcgagaacaccctgaccaacgaggggaccaacacggtggggctgatcggcagccacaac
tcgggcgacgtcagcagcggcggctccaacatcatcgccaacaaggccaccgtcaccggc
gatatccaaggcagcctcagcgatggcgccggctccagcggcggagagaaccggataacc
aacaccggcaccgtggaaggcaacatctacggcagcgttaacaccggcgttggcagcagc
ggcggctccaacatcatcgccaacaaggccaccgtcaccggcgatatccaaggcagcctc
agcgatggcgccggctccagcggcggagagaaccggataaccaacaccggcaccgtggaa
ggcaacatctacggcagcgttaacaccggcgttggcagcagcggcggcggaaacaccatc
ctcaacaagggaacggtgggaggcagcatctacggctcctacaacaccggcgccggcagc
accgccacgggcaactacatctataactacggcacggtgctcgacagcatctacgccggc
atcggcgacgacaccgtgtacctcgcctccacctccgcggtgaccaactgggtggacggc
caggccggctacgacaccctggtgttcatcaacggcgggaccttcaccggcaccggcgtg
gcccagttcatcaactttgaacgcgccgagttcgactacccgggcaccacgacgatcgcc
ggggtgctcaacctctcggacatggacgtgtacatcaacgacggaaccgtcctggtcaac
ggcaccttcatcagcgacaccctgaccaactacgccaccctgggcggctcgggcaggatc
aacgccgacgtgatcaactacggcgtcatcagcccgggcaactccatcggcaccctggcc
atcaacggcaacctgaccttcatgaacggctccatttacctgttggagattggggccaac
ggcgccaccgacctggtggaggtcagcggcaagaccgtcattaacaacgcctacatccac
acctatctgcctcgggcgctctacgccgacggcacctcctggcgtatcctgacctcctcc
ggaggcgtcaccggcaacttcgccggcatcgtgggccagcccaactcggtggtgctgagc
ctggcctcggtgaaccagggcgacgccatagacctggtgctcaaccgcaagtcctacggc
tactttgccgacacccccagcggcgcccaggtgggccgcggcatggacaagctggtcccc
gtggccaccggcaacatggaatccctgttgctgtccatggactgggacatgaacgccagc
cagatcaacaacgttctgacccagctcaaccccgagatgtacaccgccttcaccacggcc
tccttcgccacgggcagcctgttctcggacaccatgtcccgccgcctggaggagatgcgc
cagcgtaaggccctcaacctggacactcaaaagagcgccaccggtccggtgcagttggcc
gcggccgagaccgtgcccatggccggcctgggccagggcgcgagctgcgacaataccgga
tggaccctgtggggccgtgccatgggtctgtggaacaaccaggacgccgagggcggctat
ctgggctttcgccagagcggcggcggcgcggccctgggcgcggacggcctgctcaacagc
tggttccgcctgggcgtggccgtgggcgccacccgcaccgacctcagcttcagccgcgcc
aacgacagcggcgatcaggaggccttccacgccggtctgtacggtcaggccacctttggc
gaaacctacctgcgcgcggcgctttcctacgcccgcctgagcaacgactccagccgccag
gtcaccctgggttccatcgacgaccaggccaagggcgactttgacggcaacctgttcggc
gcgggcctggaggccggctacgactggcgctttgcccctgactggctcctggagcccatg
gcctccctgcagtaccagcgcgtccagcaggacggcttcaccgagagcggcatcggctgg
ctgggctacaacatcgaaaacgacgacgacgactcgttcgtgtcgcgcctgggtgtgcgc
cttacccgcctgttcaagaccgataactgggagctgctgcctcgcgtgggcttggcctgg
ctccaccagttctccgacagcaaccccagcctgaccgccagcttcatcgactacggcgct
cagagcttctcggtggaaggcgcgcctcccgcgggcgacctggccgagttcgaggccggc
ttcaccgccagcaccaattactgcgtgtccttcttcaccgattaccgcatttcctatgcc
gacgattaccaagagcagatcctgagcgtcggcttgcagtaccaattctag
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