Desulfoferula mesophila: FAK_34250
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Entry
FAK_34250 CDS
T09861
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp00470
D-Amino acid metabolism
dmp00550
Peptidoglycan biosynthesis
dmp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FAK_34250 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FAK_34250 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dmp01011
]
FAK_34250 (murD)
Enzymes [BR:
dmp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FAK_34250 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dmp01011
]
Precursor biosynthesis
Amino acid ligase
FAK_34250 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
AlaDh_PNT_C
GKRP_SIS_N
CYSTM
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BEQ16359
UniProt:
A0AAU9ET89
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All DBs
Position
complement(3690038..3691381)
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AA seq
447 aa
AA seq
DB search
MELRGKKVLVVGLGVSGRAAALLCLAQGALVRATDQNPAPPAAAELAGAGVALSLGGHRA
EDFAWAELIVLSPGVDHRLPEIERARAAGAQVIGELELGWRFTGCPTVMITGTNGKSTVT
TLVGDILAQAGFQTLVGGNLGRPVCDMAAESAAADWLVAEVSSFQTDTMELLRPRVGVVL
NITPDHQDRYPNFAAYADSKMRLFSNQADGDVAVLCADDPQVWSRRAAAPALAWGYGAAG
PQRPGGWLEGEELVLDVGQGPLRVKLPDGHLAIGFNRLNCLAACLAALACGAGAEAMERA
LAAYQVLGHRLALVGEKDGVRYYDDSKGTNVGAVAAALEALEGPVVLLLGGRDKDGRFAD
LGPLLRQRAAQVICFGEAGPKIQAQIEGFAPNLTVANLAAAVRAAAQVAKPGHAVLLSPG
CASFDAYTGYAQRGEHFQELVREVIHG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtggagctaaggggcaaaaaggtcctggtggtgggcctgggcgtgagcggccgggcggcg
gccctcttgtgcctggcccagggcgccctggtgcgcgccaccgaccaaaaccccgccccc
ccggcggccgccgagctggccggagccggagtggcgctcagcctgggcggccaccgggcc
gaggacttcgcctgggccgagctcatcgtgctcagccccggagtggaccaccgcctgccc
gagatagagcgggcccgcgccgccggagcccaggtcatcggtgagctggagctgggctgg
cgcttcaccgggtgccccacggtgatgatcaccggcaccaacggcaagagcaccgtgacc
accctggtgggcgacatcctggcccaggccgggttccagaccctggtgggaggcaacctg
ggccgcccggtgtgcgacatggccgccgagagcgcggcggccgactggctggtcgccgag
gtcagctccttccagaccgacaccatggagctgctgcggcccagggtgggggtggtgctc
aacatcactccggaccaccaggaccgctacccgaatttcgcggcctacgccgacagcaag
atgcgcctgttcagtaaccaggccgacggcgacgtggccgtgctgtgcgccgacgatccc
caggtgtggtcgcgccgcgcggccgccccggccctggcgtggggctacggcgcggccgga
ccccagcggcccggcggctggctggagggcgaggagttggtgctggacgtgggccaaggc
cccctgcgggtaaagctgcccgacggacatctggccatcggcttcaaccgcctcaactgc
ctggccgcctgcctggccgccctggcctgcggggccggggccgaggccatggaaagagcc
ctggccgcctatcaggtgttgggccaccgcctggccctggtgggggaaaaggacggggtg
cgctattacgacgacagcaagggcaccaacgtgggggcggtggccgccgccctggaggcg
ctcgaggggccggtggtgctattgctgggcgggcgcgacaaggacgggcgcttcgccgac
ctggggccgctgctcagacagcgggccgcgcaggtgatctgtttcggcgaggccgggccc
aagatccaggcccagatagaagggttcgcgcccaacctcacggtggccaacctggccgcg
gcggtgcgggcagcggcccaggtggccaagccgggccacgcggtgctccttagccccggc
tgcgctagcttcgacgcctacaccggctacgcccagcggggcgagcactttcaagaattg
gtgcgggaggtgatccatggctga
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