Desulfoferula mesophila: FAK_34960
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Entry
FAK_34960 CDS
T09861
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAK_34960 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmp03021
]
FAK_34960 (rho)
03019 Messenger RNA biogenesis [BR:
dmp03019
]
FAK_34960 (rho)
Transcription machinery [BR:
dmp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FAK_34960 (rho)
Messenger RNA biogenesis [BR:
dmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FAK_34960 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
ATPase_2
S1CSD-TOTE-2
M_Eco57I_C
AAA
AAA_25
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BEQ16430
UniProt:
A0AAU9EKB8
LinkDB
All DBs
Position
3759261..3760676
Genome browser
AA seq
471 aa
AA seq
DB search
MSENKTPRNTERRPVRGRRRSVAPPKNHNEGNGIDNGNGYDNGNGNGDGGDGGRLNILQL
KEMPIGELNAMAREYSIEGAAGMRRQDLIFALLTAQAERNGAIYGSGVLEILPDGFGFLR
APDYNYLPGPDDIYVSPSQIRRFNLRTGDTISGQIRPPKEGERYFALLKVEDINHEPPEV
ARDKILFDNLVPLYPDERITLEIEGKPKNYSARVMDLMTPIGKGQRGLIVSAPRTGKTML
LQNIANSLAVNHPEVVLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAQRHVQVAEMVI
EKAKRLVEHKRDVVILLDSITRLARAYNTVVPPSGKILSGGVDSNALHRPKRFFGAARNI
EGGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIHLERKLSDKRIFPAIDINRSGTRK
EELLLPESDLNRIWIMRKLLGPLTPVDTMEFLLEKMQGTASNAEFLDSMSR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacaagaccccacgaaacaccgagcgccgcccggtccgcggccgacgccgc
tccgtcgccccacccaaaaaccacaatgaaggcaacgggatcgacaacggtaacggctat
gacaacggcaacggcaacggcgatggcggtgacggcggccgcctgaacattctgcaactc
aaggaaatgcccatcggcgagttgaacgccatggcccgcgagtacagcatcgagggcgcg
gcgggcatgcgccggcaggatctcatcttcgccctgctcaccgcccaggccgagcgcaat
ggagccatctacggctccggtgttttggaaatattgcccgacggtttcggattcctgcgc
gccccggactacaactacctgcccggccccgacgacatctacgtctcccccagccagatt
cggcgcttcaacctgcgcaccggcgacaccatcagcggccagatccgcccccccaaggaa
ggcgagcgctacttcgccctcttgaaggtggaagacatcaaccacgagccgcccgaggtg
gcccgcgacaagatcctcttcgacaacctggtgcccctgtaccccgacgagcgcatcacc
ctggagatcgagggcaagcccaagaactactccgccagggtcatggacctgatgaccccc
atcggcaagggccagcgcggcctcatcgtcagcgcgccccgcaccggcaagaccatgctc
ctgcaaaacatcgccaactctctggcggtgaaccaccccgaggtggtgctcatcgtgctg
ctcatcgacgagcggcccgaggaggtcacggacatgcagcgctcggtcaagggcgaggtc
atctcctccacctttgacgagcccgcccagcgccacgtgcaggtggccgagatggtcatc
gagaaggccaagcgcctggtggagcacaagcgcgacgtggtgattctcttggactccatc
acccgcctggcccgggcctacaacaccgtggtgccccccagcggcaagatcctctccggc
ggcgtggactccaacgccctgcaccggcccaagcgcttcttcggcgcggcccgcaacatc
gaaggcggcggcagcctgaccatcatcgccaccgcgctgatcgacaccggcagccgcatg
gacgaggtgatcttcgaggagttcaagggcaccggtaacatggagatccacctggagcgc
aagctcagcgacaagcgcatcttcccggccatcgacatcaaccgctccggcacccgcaaa
gaagagctcttgttgcccgagtccgacctgaaccgcatctggatcatgcgcaagctcctg
ggccccctcaccccggtggacaccatggagttcttgctggagaagatgcagggcacggcc
agcaacgccgagttcctggattccatgagccgttag
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