Desulfoferula mesophila: FAK_35710
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Entry
FAK_35710 CDS
T09861
Name
(GenBank) hypothetical protein
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FAK_35710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmp03021
]
FAK_35710
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_35710
Enzymes [BR:
dmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FAK_35710
Transcription machinery [BR:
dmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FAK_35710
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FAK_35710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF4266
Tfb4
Motif
Other DBs
NCBI-ProteinID:
BEQ16505
UniProt:
A0AAU9EKL1
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All DBs
Position
3839342..3839677
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AA seq
111 aa
AA seq
DB search
MARVTVEDCLREVPNRFSLVHLTAKRVRQLREGAPPMIPVKNKEVVVALREIAAGYVYPV
SAAEAEKERAEAEARERDRLAQAQMALEAAALAEETAEEVDEAEEDEESKD
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagtaacggtggaagattgcctcagagaggtgcccaaccgcttttcgttggtg
catctgacggccaagcgggtgcgccagctgcgggagggcgctccgcccatgatcccggtg
aagaacaaagaggtggtggtggccctgcgcgagatcgcggcgggttacgtatacccggtt
agcgccgccgaggccgagaaggagcgcgccgaggccgaggcccgcgagcgcgaccgcctg
gcccaggcccagatggccctggaggccgccgccctggccgaagagaccgccgaagaggtg
gacgaggccgaagaggacgaggaatccaaggactag
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