KEGG   Desulfoferula mesophila: FAK_35710
Entry
FAK_35710         CDS       T09861                                 
Name
(GenBank) hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
dmp  Desulfoferula mesophila
Pathway
dmp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dmp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FAK_35710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmp03021]
    FAK_35710
   03400 DNA repair and recombination proteins [BR:dmp03400]
    FAK_35710
Enzymes [BR:dmp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FAK_35710
Transcription machinery [BR:dmp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FAK_35710
DNA repair and recombination proteins [BR:dmp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FAK_35710
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF4266 Tfb4
Other DBs
NCBI-ProteinID: BEQ16505
UniProt: A0AAU9EKL1
LinkDB
Position
3839342..3839677
AA seq 111 aa
MARVTVEDCLREVPNRFSLVHLTAKRVRQLREGAPPMIPVKNKEVVVALREIAAGYVYPV
SAAEAEKERAEAEARERDRLAQAQMALEAAALAEETAEEVDEAEEDEESKD
NT seq 336 nt   +upstreamnt  +downstreamnt
atggctcgagtaacggtggaagattgcctcagagaggtgcccaaccgcttttcgttggtg
catctgacggccaagcgggtgcgccagctgcgggagggcgctccgcccatgatcccggtg
aagaacaaagaggtggtggtggccctgcgcgagatcgcggcgggttacgtatacccggtt
agcgccgccgaggccgagaaggagcgcgccgaggccgaggcccgcgagcgcgaccgcctg
gcccaggcccagatggccctggaggccgccgccctggccgaagagaccgccgaagaggtg
gacgaggccgaagaggacgaggaatccaaggactag

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