Desulfoferula mesophila: FAK_35830
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Entry
FAK_35830 CDS
T09861
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FAK_35830 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmp03021
]
FAK_35830 (rpoA)
03400 DNA repair and recombination proteins [BR:
dmp03400
]
FAK_35830 (rpoA)
Enzymes [BR:
dmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FAK_35830 (rpoA)
Transcription machinery [BR:
dmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FAK_35830 (rpoA)
DNA repair and recombination proteins [BR:
dmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FAK_35830 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BEQ16517
UniProt:
A0AAU9F3M5
LinkDB
All DBs
Position
complement(3852114..3853121)
Genome browser
AA seq
335 aa
AA seq
DB search
MERNWRELIRPSRLEVDEETHTQYYGKFSCEPLERGFGHTIGNALRRILISSLQGAAVTN
VRMDGVLHEFSTINGVMEDVSDIILNLKGVRLKYLGHDPAIMHIDAKGEGVVSAGDIQAP
PDVEILNPEHPVATLGPDGSLRAELTVKTGKGYVTADRNKSEEDPIGVVALDAAFSPIVK
VNYVVTQARVGQITDYDKLTLEVFTNGAVTPEDAVAYAAKILKEQLSIFINFQEEPEPHK
EESVEEPSLNDNLFRTVDELELSVRSANCLKNADIKYIGELVQKTESEMLKTKNFGRKSL
NEIKEMLVEMGLSLGMTGLDDFPSREELEARTKEK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaactggagagaactcatcaggccgtcgcgcctggaggtggacgaagagacc
cacacccagtactacggcaagttctcctgcgagccgctggagcgaggctttggtcatacc
atcggcaacgccctcaggcgcatcctgatctcatccttgcagggggctgccgtaaccaat
gttcgcatggatggggtgttgcatgagttttccaccatcaacggagtgatggaagacgta
agcgacattatcctcaacctcaagggcgtgcggctgaagtacctgggccacgacccggcg
ataatgcatattgacgccaagggtgaaggcgtggtcagcgccggggacatccaagctccg
ccggacgtggagatactcaaccccgagcacccggtggccaccctgggaccggacggcagc
ctgcgggccgagctcacggtgaaaaccggcaagggctatgtgaccgccgaccgcaacaag
agcgaggaagatcccatcggggtggtggccttggacgcggccttcagccccatcgtgaag
gtgaactacgtggtgacccaggcccgcgtcggccagatcaccgactatgacaagctgacc
ctggaagtgttcaccaacggcgcggtgacccccgaggacgcggtggcctacgcggccaag
atcctcaaggagcagctgagcatcttcatcaacttccaggaggagcccgagccccacaag
gaagagtcggtcgaggagccctcgctcaacgacaacctcttccgcaccgtggacgagctg
gagctctcggtgcgcagcgccaattgcctgaagaacgccgacatcaaatacatcggcgag
ttggtgcagaaaaccgaatccgagatgctcaagaccaagaacttcggccgcaaatccctg
aacgagatcaaggagatgctggtcgagatgggcctgagcctgggcatgaccggcttggac
gacttccccagccgggaggaactcgaggcgaggacgaaagaaaaatga
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