Desulfoferula mesophila: FAK_40740
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Entry
FAK_40740 CDS
T09861
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dmp
Desulfoferula mesophila
Pathway
dmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAK_40740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmp03019
]
FAK_40740
Enzymes [BR:
dmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FAK_40740
Messenger RNA biogenesis [BR:
dmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FAK_40740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
HD
PolyA_pol_RNAbd
tRNA_NucTran2_2
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
BEQ17008
UniProt:
A0AAU9F3A3
LinkDB
All DBs
Position
complement(4347008..4348462)
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AA seq
484 aa
AA seq
DB search
MTHGELWRQIREHPALGALAELAGEQGAELWLCGGTLRDLLLKRRPPDLDLAVHGEAMAL
GQALAARLGGRFVPLGREFATCRVVTGHGELDLAGLRAPTLAQDLAARDFTVNALALPLG
ALWSDDPAAALLDPTGGRADLAAMVLRPAGTGVLRADPLRVLRALRFVATHGFNPAPGLE
YRLAGAAPGLFRVAAERIGGEWLRLMAGPWAVEAVGLMERCGVLTRLVPELAAGRGLEQN
PYHHLDVLGHSLACARAAGRLLAGQGPVSGALAAEGPAYLDQPHRRSLFMTAALLHDLGK
PPMRQVKDEQWATFYRHEIVGATMAAARCRALGLAKADAAWVGRLVAEHMRPFHLLGAQG
RGQLTRRGVRRMLGALGRDLPALFMLAMADTIAGRGPLRPPEAEGRLLALYEEVARLRDR
ELAAALAAPPLLDGHELMQALGLASGKEVGRLLNLVREAQLDGEIGSREEALALAKQAHD
NGAS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ttgacccacggggaactgtggcgccagatcagggaacatccggccctgggcgccctggcc
gaactggccggggagcaaggggcggagctctggttgtgcggcggcaccctgcgcgacctg
ctgttaaagcgccgcccaccggatttggacctggcggtccacggcgaggccatggccctg
ggccaggccctggccgcccgcctgggcgggcgcttcgtgcccctggggcgcgagttcgcc
acctgccgggtggtgaccgggcacggcgagctggatctggccggcctgcgcgcccccacc
ctggcccaagacctggccgcccgcgacttcacggtcaacgccctggccctgcccctgggg
gccctgtggtccgatgatcccgccgccgccttgctggaccccaccggcggccgggccgac
ttggccgccatggtgctaaggcccgccggtaccggcgtgttgcgcgccgatcccctaagg
gtgctcagggccttgcgcttcgtggccacccatggcttcaaccccgcgccgggcctggaa
taccgcttggccggggccgcgccggggctcttccgggtggccgccgagcgcataggggga
gagtggctgcgcctcatggccgggccttgggccgtggaggcggtggggctcatggagcgc
tgcggggtgctcacccgcctggtccccgagttggccgccgggcggggcctggagcaaaat
ccctaccaccatttggatgtgttgggccacagcctggcttgcgcccgcgccgccggacgg
ctcctggccgggcaagggcctgtctccggggccctggccgccgaagggccggcctacctg
gaccagccgcaccgccgctccctgttcatgaccgccgccctgctgcacgacctgggcaag
ccgccgatgcgccaggtcaaggacgagcaatgggccaccttttaccgccacgagatcgtg
ggggccacgatggccgccgcgcgctgccgggccctggggctcgccaaggccgacgcggcc
tgggtgggccgcctggtggccgagcacatgcggcctttccatctgctgggggcccagggc
cggggccagctcacccgccggggggtgcgccgcatgctgggggccctgggccgcgacctg
cccgccctgttcatgctggccatggccgacaccatcgccggtcgggggcccttgcgcccc
ccggaggcggaaggtaggcttttggccctgtatgaggaggtggcccggctgcgcgaccgg
gagttggccgccgccctggccgcgccgcccctgctggacggtcacgagctcatgcaggcc
ctagggctggcctcgggcaaggaggtgggccgtttgctcaacctggtgcgcgaggcccag
ctggacggagagataggcagtcgggaagaggcgttggccctggccaaacaggcgcatgat
aacggcgcttcttga
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