Desulfoferula mesophila: FAK_41860
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Entry
FAK_41860 CDS
T09861
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dmp
Desulfoferula mesophila
Brite
KEGG Orthology (KO) [BR:
dmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmp03019
]
FAK_41860 (yhaM)
Messenger RNA biogenesis [BR:
dmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FAK_41860 (yhaM)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BEQ17120
UniProt:
A0AAU9EMJ4
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All DBs
Position
4459445..4460557
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AA seq
370 aa
AA seq
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MSPASPELASLQPGQALDGSYLLVRASLGTTKNGKPYGMLRLGDRSGEMEGRLWDQAEEL
LAPLAPGMVVKASGRVDAYQGKTQVVVQGLEHDPTVDPGAFLPASPIPLEELQAGLAQAL
AWVSQPDLKQILEAFFVEDAEFAAAFALAPAAKGAHHAYVHGLLEHTVSTARSAHAVAAL
YPSDLEPQVLIAGALLHDVGKVAELTLGPPIDYTDQGRLEGHLVLGLRMLEAKLAALPDF
PANLAEHLRHMIISHHGAYEFGSPRKPKTAEALVLNFIDDLDAKMAMAAAARREAGPGHW
SQYHRLLERFLYTGPGPLEGLEPGDEVAPAAESPAPAEPEAAARPAKRKKRPEPPEETTP
DLFGTGGGEG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgcctcccccgaactggcctccctgcaaccgggccaggcgctggacggcagc
tatctgctggtgcgcgcctccctgggcaccaccaagaacggcaagccttacggcatgttg
cgtctgggcgaccgcagcggggagatggagggccgcctgtgggaccaggccgaagaactg
ctggcccccctggcgccgggcatggtggtcaaggccagcggccgggtggacgcctaccag
ggcaagacccaggtggtggtgcagggcctggagcacgaccccacggtcgatcccggcgcc
tttttgcccgccagccccatccccttggaggagctacaggccgggctggcccaggccctg
gcctgggtgagccagccggacctaaagcaaatactggaagcttttttcgtggaggacgcc
gagttcgccgccgccttcgccctggccccggcggccaagggggcccaccacgcctatgtg
cacggtttgcttgagcatacggtgagcaccgcccgctcggcccacgccgtggcggctctg
taccccagcgacctggagccccaggtgctcatcgccggggccctgctgcacgatgtgggc
aaggtggccgagctgaccttgggcccgcccatcgactacaccgaccagggccgcctggag
ggccacctggtgctggggcttcgcatgctggaggccaagctggccgccttgccggacttc
cccgccaacctggccgagcacctccggcacatgatcatcagccatcacggggcctacgag
ttcggcagcccacgcaagcccaagaccgccgaggccctggtgctcaacttcatcgacgac
ctggacgccaagatggccatggccgccgccgcccgccgcgaggccgggccgggccactgg
agccaataccaccgtctgctggagcgctttctctacaccggtcccggccccctggagggc
ctggagcccggcgacgaggtggcgccggcggccgaaagcccggccccggccgagcccgag
gcggccgcccggccggccaagcgcaagaagcgccccgagccgcccgaggaaaccaccccg
gacctctttggcaccggggggggagagggctag
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