KEGG   Desulfoferula mesophila: FAK_41860
Entry
FAK_41860         CDS       T09861                                 
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dmp  Desulfoferula mesophila
Brite
KEGG Orthology (KO) [BR:dmp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmp03019]
    FAK_41860 (yhaM)
Messenger RNA biogenesis [BR:dmp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FAK_41860 (yhaM)
SSDB
Motif
Pfam: HD tRNA_anti-codon HDOD TraI_2
Other DBs
NCBI-ProteinID: BEQ17120
UniProt: A0AAU9EMJ4
LinkDB
Position
4459445..4460557
AA seq 370 aa
MSPASPELASLQPGQALDGSYLLVRASLGTTKNGKPYGMLRLGDRSGEMEGRLWDQAEEL
LAPLAPGMVVKASGRVDAYQGKTQVVVQGLEHDPTVDPGAFLPASPIPLEELQAGLAQAL
AWVSQPDLKQILEAFFVEDAEFAAAFALAPAAKGAHHAYVHGLLEHTVSTARSAHAVAAL
YPSDLEPQVLIAGALLHDVGKVAELTLGPPIDYTDQGRLEGHLVLGLRMLEAKLAALPDF
PANLAEHLRHMIISHHGAYEFGSPRKPKTAEALVLNFIDDLDAKMAMAAAARREAGPGHW
SQYHRLLERFLYTGPGPLEGLEPGDEVAPAAESPAPAEPEAAARPAKRKKRPEPPEETTP
DLFGTGGGEG
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgagccccgcctcccccgaactggcctccctgcaaccgggccaggcgctggacggcagc
tatctgctggtgcgcgcctccctgggcaccaccaagaacggcaagccttacggcatgttg
cgtctgggcgaccgcagcggggagatggagggccgcctgtgggaccaggccgaagaactg
ctggcccccctggcgccgggcatggtggtcaaggccagcggccgggtggacgcctaccag
ggcaagacccaggtggtggtgcagggcctggagcacgaccccacggtcgatcccggcgcc
tttttgcccgccagccccatccccttggaggagctacaggccgggctggcccaggccctg
gcctgggtgagccagccggacctaaagcaaatactggaagcttttttcgtggaggacgcc
gagttcgccgccgccttcgccctggccccggcggccaagggggcccaccacgcctatgtg
cacggtttgcttgagcatacggtgagcaccgcccgctcggcccacgccgtggcggctctg
taccccagcgacctggagccccaggtgctcatcgccggggccctgctgcacgatgtgggc
aaggtggccgagctgaccttgggcccgcccatcgactacaccgaccagggccgcctggag
ggccacctggtgctggggcttcgcatgctggaggccaagctggccgccttgccggacttc
cccgccaacctggccgagcacctccggcacatgatcatcagccatcacggggcctacgag
ttcggcagcccacgcaagcccaagaccgccgaggccctggtgctcaacttcatcgacgac
ctggacgccaagatggccatggccgccgccgcccgccgcgaggccgggccgggccactgg
agccaataccaccgtctgctggagcgctttctctacaccggtcccggccccctggagggc
ctggagcccggcgacgaggtggcgccggcggccgaaagcccggccccggccgagcccgag
gcggccgcccggccggccaagcgcaagaagcgccccgagccgcccgaggaaaccaccccg
gacctctttggcaccggggggggagagggctag

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