Deinococcus maricopensis: Deima_0043
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Entry
Deima_0043 CDS
T01412
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dmr
Deinococcus maricopensis
Pathway
dmr03030
DNA replication
dmr03430
Mismatch repair
dmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deima_0043
03430 Mismatch repair
Deima_0043
03440 Homologous recombination
Deima_0043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmr03032
]
Deima_0043
03400 DNA repair and recombination proteins [BR:
dmr03400
]
Deima_0043
Enzymes [BR:
dmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deima_0043
DNA replication proteins [BR:
dmr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Deima_0043
DNA repair and recombination proteins [BR:
dmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Deima_0043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DUF6505
Motif
Other DBs
NCBI-ProteinID:
ADV65707
UniProt:
E8U413
LinkDB
All DBs
Position
complement(45495..46046)
Genome browser
AA seq
183 aa
AA seq
DB search
MSAQPIIFLDTETGGMDPAVHPLLTVGLVTLQDGEITRPLHLRVRHDTYTVDPEAMRVNG
IDLLTHHDEAHPPAEVAAAIRAYAAEVGRVMLGGHNFAFDLGFLRTLLPDRSRVFRCGHV
DTKTTAQFLIHAGILPKKVGTALDQLAKHFGIEYQAHDALEDARTTAIVYNEFLKLVRAA
PTT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcagccgatcatcttcctcgacaccgaaacaggcggcatggaccccgccgtc
cacccgctgctgaccgtcggcctcgtgaccctgcaggacggcgagatcacccgccccctg
cacctgcgtgtgcgccacgacacgtacaccgtcgaccccgaagcgatgcgcgtcaacggc
atcgacctcctcacgcatcacgacgaggcgcacccccccgccgaagtcgccgcggccatc
cgcgcgtacgccgccgaggtgggccgcgtcatgctcggcgggcacaacttcgcgttcgac
ctcgggttcctgcgcacgctcctgccggaccgcagccgcgtcttccggtgcgggcacgtc
gacaccaaaacgaccgcgcagttcctgatccacgcgggcatcctgcccaaaaaggtcggg
acggcgctcgaccagctcgccaagcacttcggcatcgagtaccaggcacacgacgccctc
gaagacgcgcgcaccaccgccatcgtgtacaacgagttcctgaaactcgtccgcgccgca
cccaccacctga
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