Deinococcus maricopensis: Deima_1179
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Entry
Deima_1179 CDS
T01412
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dmr
Deinococcus maricopensis
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmr03032
]
Deima_1179
03400 DNA repair and recombination proteins [BR:
dmr03400
]
Deima_1179
Enzymes [BR:
dmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deima_1179
DNA replication proteins [BR:
dmr03032
]
Prokaryotic type
DNA Topoisomerases
Deima_1179
DNA repair and recombination proteins [BR:
dmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deima_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HCV_NS5a_1b
Motif
Other DBs
NCBI-ProteinID:
ADV66831
UniProt:
E8U6Z2
LinkDB
All DBs
Position
complement(1283393..1284415)
Genome browser
AA seq
340 aa
AA seq
DB search
MSASATTLLQDTYLRRAGDHPCRFRYTHPDGTPYTDEAGLARIAKLAIPPGYQDVYVSPD
ADADLQAFGRDAAGRLQYRYHADFLQARAGRKWARLGRFARALPAFRTATTTDLRRTGLP
ERKVLAIMTRVLHVARFRVGSEAYARAHRTYGLSTLLKRHVRVDGTTVEFNFKGKHGVQQ
HRFITDRTVASAVERLLELPGPHLFQAVQADGTPCRIHAPEVNAYLRDVMGPFTAKDFRT
WGGTLLAAEYLAELGAPATERDARKGIVECVKAVAEDLGNTPAVVRAHYVCPVIFDRYAE
GRVLDDFEPRANRLPTSLEGLTRAEAALARLLASRPRKGE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtccgccaccaccctgctgcaagacacctacctgcgccgcgcaggcgatcac
ccctgccgcttccgttacacccaccccgacggcaccccatacaccgacgaggccggcctc
gcgcgcatcgcgaagctcgccattccgcccggctaccaggacgtgtacgtcagccccgac
gcggacgcggacctgcaggcgtttgggcgggacgccgccgggcgcctgcagtaccggtac
cacgcagacttcctgcaggcccgcgccggccgcaagtgggcgcgcctgggccgcttcgcg
cgggccctgccggccttccggaccgccacgaccacggacctgcgccgcaccggcctgccg
gaacgcaaggtgttagccatcatgacgcgcgtgctgcacgtcgcgcgcttccgggtgggc
agcgaggcgtacgcgcgcgcgcaccgcacgtacggcctctcgacactgctcaaacgccac
gtccgcgtggacggcaccaccgtggaattcaacttcaagggcaaacacggcgtgcagcag
caccgcttcatcaccgaccgcacggtggcgagcgccgtcgagcgcctgctggagctgcct
ggcccgcacctcttccaggccgtgcaggcggacggcacgccctgccgcattcacgcgccc
gaggtgaacgcctatctgcgagacgtcatgggcccgttcaccgcgaaggacttccggacg
tggggcggcacgctgctcgccgcggagtacctcgcggaactcggcgcgcccgccacggaa
cgagacgcccgcaaaggcatcgtcgagtgcgtgaaagccgtcgcggaggacctcggcaac
acgcccgccgtggtccgcgcgcactacgtctgcccggtcatcttcgaccgctacgccgaa
gggcgggtgctggacgatttcgagccgcgcgccaaccgactccccacttcgctggagggc
ctcacgcgcgccgaagcggccctcgcgcgcctgctcgccagccgcccccgcaaaggcgag
tga
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