Deinococcus maricopensis: Deima_2085
Help
Entry
Deima_2085 CDS
T01412
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmr
Deinococcus maricopensis
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmr03016
]
Deima_2085
Enzymes [BR:
dmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Deima_2085
Transfer RNA biogenesis [BR:
dmr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Deima_2085
Prokaryotic type
Deima_2085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
HIF-1a_CTAD
Motif
Other DBs
NCBI-ProteinID:
ADV67728
UniProt:
E8U9I9
LinkDB
All DBs
Position
2257626..2258561
Genome browser
AA seq
311 aa
AA seq
DB search
MPVVVADKPLGLTSHDVVARARRALATRRVGHTGTLDPLATGVLVLCVNDSTKLVQFMEH
DSKDYLAWVSLGAGTPTLDAEGPVDATADVAGVDEAEVRAVLRGFLGVQQQVPPQYSAVQ
VGGQRAYAVARAGGALDLPAREVVLHELELLGVFPSVDAAPRTFAPNEQGQYAPAADGRT
FTLPPALGAFPTLLVRARVGSGTYIRSLARDIGAALGVPAHLAGLVRTRVGHFTLAGAMG
LEDLAVAPVTPDADALDLPRIEATETLALMLRQGKRPRHPLQGRALVLRGQELVAVVDGN
GEQLRVVRAWA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgtcgttgcggataaacctctgggcctcacttctcatgacgtggtcgcgcgt
gcgcggcgcgcgctggccacgcgccgcgtggggcacacgggcaccctggacccgctcgcc
acgggggtgctggtgctgtgcgtgaacgacagcacgaagctggtgcagttcatggagcac
gacagcaaggattacctcgcgtgggtgagcctgggtgcaggcaccccgaccttggacgcg
gaaggtccggtggacgcgaccgccgacgtggcgggcgtggacgaagcggaagtgcgcgcg
gtgctgcgcgggttcctgggcgtgcagcagcaggtgccaccacagtacagcgccgtgcag
gtgggcgggcagcgggcgtacgccgtggcgcgcgccgggggggcgctggacctgccggcc
cgcgaggtggtcctgcatgaactggagctgctgggcgtcttcccgagtgtggacgcggcg
ccgcggacgttcgcgccgaacgagcagggacagtacgcgccggcggcggacgggcggacc
ttcacgctgccgccggcgcttggggcgttcccgacgctcctggtgcgcgcgcgcgtgggg
agcgggacgtacatccgcagtctcgcgcgggatatcggcgcggcgctgggcgtgccggcg
cacttggcgggcctagtgcggacgcgggtgggccacttcacgcttgcgggcgccatggga
ctggaggacctggcggtcgcgccggtcacgccggacgcggacgcgctggacctgccgcgc
atcgaggcgaccgagacgctcgcgctgatgctgcgtcagggtaagcggccccgccatccc
ctgcaggggcgcgcgctggtgctgcgtggtcaggagttggtggcggtcgtggacggcaac
ggggagcagctgcgggtcgtgcgcgcctgggcgtga
DBGET
integrated database retrieval system
