Deinococcus maricopensis: Deima_2707
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Entry
Deima_2707 CDS
T01412
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dmr
Deinococcus maricopensis
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmr03032
]
Deima_2707
03400 DNA repair and recombination proteins [BR:
dmr03400
]
Deima_2707
Enzymes [BR:
dmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deima_2707
DNA replication proteins [BR:
dmr03032
]
Prokaryotic type
DNA Topoisomerases
Deima_2707
DNA repair and recombination proteins [BR:
dmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deima_2707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ADV68337
UniProt:
E8UB98
LinkDB
All DBs
Position
2888785..2891691
Genome browser
AA seq
968 aa
AA seq
DB search
MPKTLVIVESPAKAKTIEKYLGKGYVVESSIGHIRDLPRSAAEIPERFKSQAWARLGLNP
DEDFRALYVVAPEKRAHVAKLKKLAADADEVVLATDDDREGESIAWHLLQELKPKVPVRR
MVFHEITKEAILKAIQSPRTIDEHLVEAQEARRALDRLYGYEVSPVLWRKVAPKLSAGRV
QSVATRMLVERERERMRFVSATWWDIEARLTTQASERFPANLLEVDGVRLAGGKDFDALT
GQLKRGANVLLLNEADATALAAALTGQPYRVLSAEEKPFTQRPYPPFITSTLQQEGGRKL
GFSASRTMRAAQRLYEQGFITYMRTDSTNLSAEATEAARDQARKLYGPAFVPAAPRVYAK
KAKNAQEAHEAIRPAGASFRTPDSVRGELGGSSDEWRLYDLIWKRTVASQMSDARGRRLQ
VRLEGRSGDGRTALLGANGRTIDFPGFLRAYVEGSDDPEAQLGDREVTLPPLNPGDTVNG
DAFKAAGHATQPPARYTEASLVQALEAAGIGRPSTYASILTTIQDRGYAMKKGQALVPTW
TAFATSALLEGHFGRLVDYDFTARMEEDLDDIAGGRQQRAPYLRGFYYGEGGGLGLKGLI
ASNMEAIDPRVVATIEIPKLAGSGIELRVGRYGPYLARGEQKANLPDDLAPDELTFEKAE
ELFNRPSGERPLGADPDTGLTVVARAGRFGPYVTLGEENPPVKTASLFPGDDLTTINLDR
ALELLSLPRLVGESEGEEVWALNGKFGPYLKRGNDSRSLANHDQLFTVTLDEAEELFRQP
RYGAKRAAAGPLKRYEYADRSAIELRSGRFGPYLTDGERNATLRRDETPESLTDADARSI
LEERGKEPKKKPGKAPAKAKAKPAAKPTKAAGSNAKPKAGTAKPAAKNAARKATAKAAAA
SPAWADLRAHLGVLGEQERTLVTATRDAGRKVEDVAPELGLDIKKAKGMALQASKKLNQA
YRAAQGDA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaccctcgtaatcgttgaatctcccgccaaggccaagaccattgagaagtac
ctcgggaaggggtacgtggtcgagtccagcatcgggcacatccgcgacctcccccggagc
gccgcggaaatccccgagcgcttcaagagccaggcctgggcgcgactgggcctgaacccg
gacgaggatttccgcgcgctgtacgtcgtggcgcccgaaaaacgcgcgcacgtcgcgaaa
ctcaagaagctcgctgccgacgccgacgaagttgtcctcgccaccgacgatgaccgcgaa
ggcgaaagcatcgcgtggcacctcctgcaggaactcaaacccaaagtcccggtgcggcgc
atggtgttccacgagatcaccaaggaagccatcctgaaggccattcagagcccgcgcacc
atcgacgagcacctcgtggaggcgcaggaggcgcgccgcgcccttgaccgcctgtacggg
tacgaggtgagcccggtgctgtggcgcaaggtcgcgccgaaactgtcggcgggccgcgtg
cagagcgtcgcgacgcgcatgctggtggagcgcgagcgggaacgcatgcgcttcgtgagc
gccacctggtgggacatcgaggcgcgcctgacgacgcaggcgagcgaacgcttccccgcg
aacctgctggaagtggacggcgtgcgcctcgcgggcggcaaggacttcgacgcgctcacc
gggcagctcaagcgcggcgcgaacgtcctgctgctgaacgaggcggacgccacggcgctg
gcggccgccctcaccgggcagccgtaccgggtgctcagcgccgaggagaagccgttcacg
cagcgtccgtacccgccgttcatcacgagcacgctgcagcaggagggcgggcgcaagctg
ggcttcagcgcaagccgcaccatgcgcgccgcgcagcgcctgtacgaacagggcttcatt
acgtacatgcgcacggacagcacgaatctgagcgccgaggcgaccgaggcagcgcgcgat
caggcccgcaagctgtacggcccggcgttcgtgccggccgcgccgcgcgtgtacgccaag
aaggccaagaacgcgcaggaggcgcacgaggcgatccgcccggccggcgcgagcttccgc
acgcccgacagcgtgcgcggcgaactgggcggcagcagcgacgagtggcgcctgtacgac
ctgatctggaaacgcaccgtcgcgtcgcagatgagtgacgcgcgcggtcgccggctgcag
gtccgcctggagggccgcagcggggacggccgcacggcgctgctcggcgcgaacggccgc
accatcgacttccccgggttcctgcgcgcgtacgtggaaggcagcgacgaccccgaagcg
cagctcggtgaccgcgaagtgaccctgccgcccctcaacccgggcgacaccgtgaacggc
gacgccttcaaggccgccgggcacgccacgcagccgcccgcgcggtacaccgaggcgagc
ctcgtgcaggcgctggaggccgcgggcattggccgcccgagcacgtacgcgtcgattctc
acgaccattcaggaccgcgggtacgccatgaagaaagggcaggcgctcgtgcccacctgg
acagcgttcgcgaccagcgcgctgctggagggccacttcgggcggctggtggactacgac
ttcaccgcgcgcatggaagaggacctcgacgacatcgcgggcgggcggcagcagcgcgcg
ccgtacctgcgcggcttctattacggcgagggcggcggcctgggcctcaagggcctgatc
gccagcaacatggaggccatcgacccgcgcgtcgtggcgaccatagagattccgaagctg
gcgggcagcggcattgagctgcgcgtcgggcggtacgggccgtacctcgcgcgcggcgag
cagaaggcgaacctgccggacgacctcgcgccggacgagctgacgttcgagaaggccgag
gagctgttcaaccgcccgagcggcgagcggcccctcggcgcggacccggacacgggcctg
accgtcgtggcgcgcgcgggccgtttcgggccgtacgtgacgctcggcgaggagaacccg
ccggtcaagacggcgagcctgttccccggcgacgacctgaccaccatcaacctggaccgc
gcgctggagctgctgagcctgccgcgtctggtgggcgagagcgagggcgaggaggtgtgg
gcgctgaacggcaagttcgggccgtacctgaagcgcggcaacgactcgcgcagcctcgcg
aaccacgaccagctgttcacggtgacgctcgacgaggccgaggagttgttccggcagccc
cgttacggcgcgaaacgcgcggcggccgggccgctcaaacgctatgagtacgcggaccgc
tcggccatcgagctgcgcagcgggcgcttcgggccgtacctgacggacggggagcgcaac
gccaccctgcgccgcgacgagacgcccgaaagcctcacggacgccgacgcccgctcgatc
ctggaggagcgcggcaaggaaccgaaaaagaaacccggcaaggcacccgcgaaagccaag
gcgaaacctgccgcgaagccaaccaaagcggcgggcagcaacgccaaacccaaagcgggc
accgcgaaacccgccgcgaagaacgccgcccggaaggccaccgccaaggccgccgcggcc
tcacctgcctgggcggacctgcgcgcgcacctgggcgtgctcggtgagcaggaacgcacg
ctcgtaaccgccacgcgcgacgcgggccgcaaggtcgaggacgtcgccccggaactcggc
ttggacatcaagaaggccaaaggcatggcgctgcaggccagcaagaagctcaaccaggcg
taccgcgccgcgcagggggacgcttga
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