Deinococcus maricopensis: Deima_2848
Help
Entry
Deima_2848 CDS
T01412
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dmr
Deinococcus maricopensis
Pathway
dmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deima_2848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmr03019
]
Deima_2848
Messenger RNA biogenesis [BR:
dmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Deima_2848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
LapA_dom
UPF0242
PFF1_TM
Propep_M14
DUF7177
Motif
Other DBs
NCBI-ProteinID:
ADV68477
UniProt:
E8UBN8
LinkDB
All DBs
Position
3025378..3027048
Genome browser
AA seq
556 aa
AA seq
DB search
MSATIYVLIGLLIGVAVGGFVFFTLGRRQRAALDDAQQRAARAEADQIRADAETHARRVR
EEANSEAERLREVAQRMQLDAARRSQEAERQEAHANAQRDAAVQQTQREREALLADRAET
KRERDELKREIERLNRRAEQLDARGEKLDALEEKLEREQERVLDELASIAERARQVDVRL
MEVAGLTPEAARDLILGRLDAELEEEKAVRVRASIEKASAEAKRTARSIIAQAIQRSASE
TSAAMSVSVVPIPSDAMKGRLIGREGRNIRAFEALTGVDLIIDDTPEAVILSSFNPVRRE
VARHVLEGLVADGRIHPTRIEEMVHKAQDDMKAFMHNQGEEAAHEAGVLGVKPGLVQLLG
RMYFRTSYGQNVLKHSVQVAHLTGIMAAELGLDDAMARRAGLMHDVGKSIDREIEGTHVE
IGVSLAKRFGEPFEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARREELESYIKR
LEQLESIAVSFPGVNQAYAIQAGREVRVIVQPEKVTDAQSTLLAREIAGRIEQDMEYPGQ
VQVTVVRESRAVEYAK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaacgatctacgtgttgatcgggctcctgatcggtgtggcggtcgggggcttc
gtatttttcacgctgggcagacgccagcgggccgcgctggatgacgcccagcagcgggcc
gcgcgcgcggaagcggaccagatccgcgccgacgccgaaacgcacgcacgccgcgtgcgc
gaagaagcgaacagcgaagccgaacgtctgcgcgaagtcgcgcagcgcatgcaactcgac
gccgcacgccgctctcaggaagccgaacgtcaggaagcacacgcgaacgcgcaacgcgac
gccgccgtgcaacaaacccagcgcgaacgcgaggcgctgctcgccgaccgcgccgaaacc
aaacgcgaacgcgacgaactcaaacgcgaaatcgaacgcctcaaccgccgcgccgaacag
ctcgacgcgcgcggcgagaaactcgacgcgctcgaagagaaactcgaacgcgaacaggaa
cgcgtcctcgacgaactcgccagcatcgccgaacgcgcacgccaggtggacgtgcgtctc
atggaagtcgccggtctcacccccgaagcggcgcgcgacctgatcctcggccgcctcgac
gcggaactcgaagaggaaaaggccgtgcgcgtgcgcgccagcatcgagaaggccagcgcc
gaagcgaaacgcaccgcgcgcagcatcatcgcgcaggccatccagcgcagcgccagcgaa
accagcgccgccatgagcgtctcggtggtgcccatcccctccgacgccatgaaaggccgc
ctgatcggccgcgaaggccgcaacatccgcgcgttcgaagcgctcaccggcgtggacctc
atcattgacgacacgcccgaagcggtgatcctcagcagcttcaacccggtgcgccgcgaa
gtcgcgcggcacgtcctcgaaggcctcgtcgcggacggccgcatccaccccacccgcatc
gaggaaatggtccacaaggcccaggacgacatgaaggcgttcatgcacaaccagggtgag
gaagccgcgcacgaagccggcgtccttggcgtgaagcccggcctggtgcagctcctgggc
cgcatgtacttccgcaccagctacggccagaacgtcctcaagcacagcgtgcaggttgcg
cacctcactggcatcatggccgccgaactgggcctggacgacgccatggcgcgccgcgcc
ggcctgatgcacgacgtcggcaaaagcatcgaccgcgagatcgagggcacgcacgttgag
atcggcgtcagcctcgcgaaacgcttcggcgagccgttcgaagtcattgacgccatcgcg
caccaccacgacccggaaaacggcgagacgctctacagcgtcctcgtggccgccgcggac
gccatcagcgccgcccgccccggcgcacgccgcgaggaactcgaaagttacatcaaacgc
ctcgagcagctggaaagcatcgccgtgagcttccccggcgtcaaccaggcgtacgccatc
caggcgggccgcgaggtgcgcgtcatcgtgcagccggaaaaggtcacggacgcgcagtcc
acgctgctcgcccgcgaaatcgccggccgcatcgagcaggacatggagtaccccggccag
gtgcaggtcacggtcgtgcgcgaaagccgcgccgtcgaatacgcgaagtaa
DBGET
integrated database retrieval system
