Deinococcus maricopensis: Deima_2913
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Entry
Deima_2913 CDS
T01412
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dmr
Deinococcus maricopensis
Pathway
dmr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Deima_2913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmr03021
]
Deima_2913
03400 DNA repair and recombination proteins [BR:
dmr03400
]
Deima_2913
Enzymes [BR:
dmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Deima_2913
Transcription machinery [BR:
dmr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Deima_2913
DNA repair and recombination proteins [BR:
dmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Deima_2913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
ADV68542
UniProt:
E8UBV3
LinkDB
All DBs
Position
complement(3086361..3087326)
Genome browser
AA seq
321 aa
AA seq
DB search
MDSKRPQLKARVDGNYGEFTLEPLKRGYGVTIGNPLRRILLSSIPGTAVTSVYIEDVLHE
FSTIPGVKEDVIQLILNLKELVVKFHAPGPKTLTLRAQGQGVVTAGAFEVPSDAEIVNPD
LVIANLAEDGKLVMEVRVEEGEGYVPADKHATKDRINSIPVDAVYSPVRRVAYHVENTRV
GQQTDLDRLIIRIWTDGSADPQSALDMAVDTLRDELSVFGNVETIQAETVVTPAAYDLPQ
PSALSINPQPYPADLDSPKVTLEGLGLTTRVLHSLKEEGIDSVDALCALSDRDLKKVPGI
GERSLDEIKAQLAQFGLSLKD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtggacagcaagcgcccccaactcaaagctcgcgttgacggcaactacggcgagttcacg
ctcgaaccgctgaagcgcggctacggcgtcaccatcgggaaccccctgcgccggatcctg
ctttcctcgattcctggcactgccgtgaccagcgtgtacatcgaggacgtgctgcacgaa
ttcagcaccatccccggcgtcaaggaagacgtcatccagctcatcctgaacctcaaggaa
ctcgtcgtgaagttccacgctcccggtcccaagaccctcaccctgcgtgcgcagggccag
ggcgtcgtgactgccggcgcgttcgaggtgcccagcgacgctgagatcgtcaacccggac
ctcgtcattgcgaacctcgccgaagacggcaagctcgtcatggaagtccgcgtcgaggaa
ggcgaagggtacgtccccgccgacaagcacgccaccaaggaccgcatcaacagcatcccg
gtggacgccgtgtactccccggtgcgccgcgtcgcgtaccacgtggagaacacccgcgtc
ggtcagcagacggaccttgatcgcctgatcatccgcatctggacggacggcagcgccgac
ccgcaaagcgcgctcgacatggccgtggacacgctccgcgacgaactgagcgtgttcggc
aacgtcgaaaccatccaggcggaaacggtcgtcacgcccgccgcgtatgacctgccgcag
cccagcgcgctgtccatcaacccgcaaccctaccccgcggacctggacagccccaaagtc
accctggaaggcctcggcctcaccacgcgcgtgctgcactccctcaaagaggaaggcatc
gacagcgtggacgccctgtgcgccctttccgaccgtgacctcaagaaagtccccggcatc
ggcgaacgctcgctcgacgagatcaaagcgcaactcgcgcagttcggcctgagcctcaag
gactga
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