Oceanidesulfovibrio marinus: E8L03_00145
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Entry
E8L03_00145 CDS
T06743
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms00521
Streptomycin biosynthesis
dms00523
Polyketide sugar unit biosynthesis
dms00525
Acarbose and validamycin biosynthesis
dms00541
Biosynthesis of various nucleotide sugars
dms01055
Biosynthesis of vancomycin group antibiotics
dms01100
Metabolic pathways
dms01110
Biosynthesis of secondary metabolites
dms01250
Biosynthesis of nucleotide sugars
Module
dms_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E8L03_00145 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E8L03_00145 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
E8L03_00145 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E8L03_00145 (rfbB)
00525 Acarbose and validamycin biosynthesis
E8L03_00145 (rfbB)
Enzymes [BR:
dms01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
E8L03_00145 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
KR
Statherin
Motif
Other DBs
NCBI-ProteinID:
QJT07418
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All DBs
Position
complement(30656..31678)
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AA seq
340 aa
AA seq
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MRLLVTGACGFIGANFLYYLFETDPDVYVVNLDKLTYAGNPLSVKPLEDAHGGVRYFFEH
GDINDPETVSRIIEEHKIEAVVNFAAESHVDRSINDPSPFVTTNVQGTQNLLECARRAGL
ERFVHVSTDEVYGTLGPDGKFTEETPLAPNSPYSASKASADLFCRAYFETYGFPVAITRC
SNNYGPYQFPEKLIPLMFTKAENDEPLPVYGDGKNVRDWIYVRDHCRGVDLTLRKGKPGK
VYNFGGNAEKQNIEVVRTMLSTLGKPDSLISYVKDRPGHDLRYAMDYSYAQKELGFEPEY
TFERGLKETIDWYRDNREWLDNVRSGAYLEFMKKWYGERS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcttgtcaccggagcgtgcggctttatcggcgccaacttcctctactatttg
ttcgagaccgacccggatgtctacgtcgtcaacctcgacaagctcacgtacgcgggcaac
cccttgagcgtgaagcccctggaggatgcgcacggcggcgtccggtactttttcgagcac
ggcgacatcaatgatcccgagacggtcagccggatcattgaggagcacaagatcgaggcc
gtggtgaactttgcggccgagagccatgtggaccggtccatcaacgacccctcgccgttt
gtcaccaccaacgtccagggcacgcagaacctgctggagtgtgcgcgccgcgccgggctc
gaacggttcgtgcatgtctccacggacgaagtctatggcaccctgggcccggacggcaag
ttcaccgaagagaccccgctggcgcccaacagcccctactccgcctccaaggcctcggcc
gatctcttctgccgcgcctacttcgagacgtacggcttccctgtggccatcacccgctgc
tccaacaactatgggccgtaccagttcccggaaaagctcatccctctcatgttcaccaag
gccgagaacgacgagcccctgcccgtgtacggcgacggcaagaacgtgcgcgactggatc
tacgtgcgcgaccactgccgcggcgtggacctcaccctgcgcaagggcaagcccggcaag
gtctacaacttcggcggcaacgccgagaagcagaacatcgaggtggtgcgcaccatgctc
tccacccttggcaaaccggactcgctcatcagctatgtgaaggaccggcccggccacgac
ctgcgctacgccatggattactcctacgcccagaaagagctcggcttcgagccggagtac
acctttgaacgcggcctgaaggaaaccatcgactggtaccgcgacaaccgcgagtggctc
gacaacgtgcgcagtggcgcctacctcgagttcatgaaaaagtggtacggagagcgctca
tga
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