Oceanidesulfovibrio marinus: E8L03_01480
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Entry
E8L03_01480 CDS
T06743
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E8L03_01480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dms03021
]
E8L03_01480
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_01480
Enzymes [BR:
dms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E8L03_01480
Transcription machinery [BR:
dms03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E8L03_01480
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E8L03_01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Spectrin_7
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QJT07675
LinkDB
All DBs
Position
322323..323366
Genome browser
AA seq
347 aa
AA seq
DB search
MLIKQGERLINTRNWQELVKPEQIVRDAKGDTSYGKFVCEPLERGFGTTIGNALRRVLLS
SLQGAAPVAVNIEGVQHEFTTIPGVIEDVTDIVLNIKAVRFAMASEEPQHIQLTASGKGV
VTAAAIKENQNVVVLNPDQHIATLSEDVDLKIDIEVRMGKGYVPAEMHEGLSEEIGLIKL
DSSFSPVRKVAYTVDPARVGQMTNYDKLILEVWTDGSITPEDSIAYSAKILKEQLSVFIN
FDEHVSEEKQRSGSAPTDLNESLFKSIDELELSVRATNCLKSANISLVGELVQRTENDML
KTKNFGRKSLDEIRRVLHDMGLEFGQKIEGFEQSYQEWLKRKEHNEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcaagcaaggcgaacgcctcatcaacacgcgcaactggcaagagcttgtcaag
ccggagcagatcgtccgcgatgcaaagggcgacaccagctatggcaagtttgtttgcgag
cccctggagcgcggattcggcacgacgataggcaacgccctgcgccgcgttctcctgtcg
tcgctgcagggcgcggctccggtggctgtgaacatcgagggcgtacaacacgagttcacg
accatcccgggcgtcatcgaagatgtgacggacatcgttctgaacatcaaggccgtccgg
ttcgccatggcctccgaggaaccgcagcacatccagctcactgcctcgggcaagggcgtc
gtcaccgccgccgcgatcaaggagaaccagaacgtcgtcgtgctcaatccggatcaacac
atcgccacgctctcggaggatgtcgacctcaagatcgacatcgaagtccgcatgggcaag
ggctacgtgccggccgagatgcacgagggcctctcggaagagatcgggctgatcaagctc
gactcctctttctcccccgtgcgcaaggtggcgtacaccgtggatcccgcgcgtgtcggc
cagatgaccaactacgacaagctcatcctcgaagtctggaccgatggctccataactccc
gaggattccatcgcctactccgcgaagatcctcaaggagcagctctccgtgttcatcaac
ttcgatgagcacgtctccgaggaaaagcagcggtccggcagcgcccccaccgacctcaac
gagagcctcttcaagagcatcgacgagctcgaactctccgttcgcgccaccaactgcctg
aagagcgccaacatctcgctggtgggcgagcttgtgcagagaaccgagaacgacatgctg
aagaccaagaacttcggccgcaaatccctcgacgagatccggcgcgtgctccacgacatg
ggcctcgagttcggtcagaagatcgagggcttcgagcagagctatcaagaatggcttaag
aggaaagagcacaatgaggcataa
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