Oceanidesulfovibrio marinus: E8L03_03475
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Entry
E8L03_03475 CDS
T06743
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dms
Oceanidesulfovibrio marinus
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dms03032
]
E8L03_03475
03036 Chromosome and associated proteins [BR:
dms03036
]
E8L03_03475
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_03475
DNA replication proteins [BR:
dms03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E8L03_03475
Chromosome and associated proteins [BR:
dms03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
E8L03_03475
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
E8L03_03475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QJT08040
UniProt:
A0A6P1ZEJ2
LinkDB
All DBs
Position
complement(788747..789022)
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AA seq
91 aa
AA seq
DB search
MNKSELIKKLSEENNIPLDEAALVVNTFVGSVKDSLFNGDRVEIRGFGSFKIKGYGGYVG
RNPKSGEVVEVKPKQLPFFRAGKELKDFLNT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtgagctgatcaagaaactgtctgaggagaacaatatcccgttggacgag
gcggctctggtggtcaacacctttgtcggttcggtcaaggattccctcttcaatggcgac
cgcgtagagattcgcggctttggctccttcaagatcaagggctacggtggctatgttggc
cgtaatcccaaaagcggcgaggtcgtggaggtcaagcccaagcagcttcccttcttccgt
gccggtaaagaactcaaggatttcctgaatacatga
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