Oceanidesulfovibrio marinus: E8L03_04395
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Entry
E8L03_04395 CDS
T06743
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dms
Oceanidesulfovibrio marinus
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dms03032
]
E8L03_04395
03036 Chromosome and associated proteins [BR:
dms03036
]
E8L03_04395
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_04395
DNA replication proteins [BR:
dms03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E8L03_04395
Chromosome and associated proteins [BR:
dms03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E8L03_04395
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E8L03_04395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
RNA_polI_A14
Motif
Other DBs
NCBI-ProteinID:
QJT08209
LinkDB
All DBs
Position
complement(992726..992998)
Genome browser
AA seq
90 aa
AA seq
DB search
MTKADLVVKVAEKANLTKADAERALNAFLEAVESTLVKEGKLTLTGFGTFVVETRQERKG
RNPRTGQEITIPASKVVKFRPGKLLKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggctgacctcgtagtgaaggtggcggagaaagcgaacttgaccaaggccgac
gcagagcgcgccctgaacgcttttctcgaggctgtggagtccaccctggtgaaggaaggt
aaactgaccctgaccggtttcgggacgtttgttgtcgagactcgtcaggagcgcaagggc
cgcaacccgcgcaccggtcaagaaatcacgatccccgcttccaaggtcgtcaagttccgg
cccggcaagctcctcaaggacgccgtcaagtaa
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