Oceanidesulfovibrio marinus: E8L03_04740
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Entry
E8L03_04740 CDS
T06743
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E8L03_04740 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_04740 (uvrB)
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E8L03_04740 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E8L03_04740 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_19
AAA_16
DUF87
AAA_5
AAA_7
AAA
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QJT08275
UniProt:
A0A6P1ZIX3
LinkDB
All DBs
Position
complement(1063020..1065047)
Genome browser
AA seq
675 aa
AA seq
DB search
MSDRFKLVSEFTPKGDQPTAIEALAENLEQGVRDQVLLGATGTGKTFTMASVIERLNRPA
LILAPNKTLAAQLYNEFRALFPKNAVEYFVSYYDYYQPEAYVPQSDTYIEKDSSINDEID
KLRHAATHALLTRRDVVIVASVSCIYGLGSPEYYSKMVIPVEVGQTLSMKALMNRLVEVQ
YTRNDLDFHRGTFRVRGDVLEVIPAYHHERALRLEFFGDEIEAMYEVDPLTGEVGESVSK
TVIYPASHYVSDRDNLTRAMEDIREELGERLRAFQEENKLVEAQRLEQRTMLDLEMIEEM
GYCNGIENYSRHLDGRTQGEPPSCLLDYFPDDFLLFIDESHIAVSQVGAMYKGDISRKST
LVEYGFRLPSALDNRPLHFDEFLERINQTIYVSATPANWEIERSQGIVVEQIIRPTGLLD
PMVEVRPTKGQVDDLMAEIKARAESDERVLVTTLTKRMAEDLTEYCNNLGVPARYLHSDI
DTLERVAIIQALRAGEFTALVGINLLREGLDIPEVSLVAILDADKEGFLRSTRSLIQTFG
RAARNVGGRVILYADAMTPSMRNAIEETERRREKQLAYNEEHGITPETVKKELSNILESI
YAGSKDKTKRDRRREVVLAEEGADYSMNPAAASREIKKLERAMREAAKDLEFERAAELRD
RIRAIRETFLAPQED
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgtttcaaactcgtcagcgaattcactcccaagggagaccagcccacggcc
attgaggcgctagcggaaaacctggagcagggcgtacgcgaccaggtgctcctgggcgcc
acgggcacgggcaagaccttcaccatggccagcgtcatcgaacgcctgaaccggcccgcg
ctgattcttgctcccaacaagaccttggccgcgcagctctacaacgagttccgggccctg
ttccccaagaacgcggtggagtacttcgtcagctactacgactattaccagccggaagcg
tacgttccccagtcggacacctatatcgagaaagactcgtccatcaacgatgagatagac
aagctgcgccacgccgccacgcacgcgctgctcacccggcgcgacgtggtcatcgtggcc
tcggtctcctgcatctatggcctgggctcgccggaatactactccaagatggtcatcccg
gtggaggtgggccagaccctttccatgaaggcgctgatgaaccggctggtggaggtgcag
tacacccgcaacgacctggacttccaccgcggcactttccgcgtgcgcggcgacgtgctg
gaggttattccggcctaccaccacgagcgcgccctgcggctggagttcttcggcgacgag
atcgaggccatgtacgaggtggatcccctgaccggcgaggtgggcgagtccgtctccaag
accgttatctatccggccagccactacgtatcggaccgcgacaacctcacccgcgccatg
gaagacatccgcgaggagctgggggagcgcctgcgcgccttccaggaagagaacaaactg
gtggaggcccagcggctggagcagcgtaccatgctcgatctcgaaatgattgaggagatg
ggctactgcaacggcatcgagaactactcgcgccatctggacggccgcacgcagggcgag
ccgccctcgtgtctgctggactactttccggacgacttcctcctgttcatcgacgagtcg
cacatcgccgtctcccaggtgggggccatgtacaagggcgatatctcccgcaagtccacc
ctggtggagtacggcttccgcctgccgtctgccctggacaaccggcccctccactttgat
gagttcctggagcgcatcaaccagaccatctatgtctcggccacgcctgccaactgggag
atcgagcgctcccagggcatcgttgtcgagcagattatccggcccaccgggctgctggat
cccatggtggaggtgcggcccaccaagggccaggtggacgacctcatggccgagatcaag
gcccgcgccgaaagtgacgagcgcgtgctcgtgaccaccctgaccaagcgcatggccgag
gacctgaccgagtactgcaacaacctcggcgtaccggcgcgctacctgcactccgacatc
gacaccctggagcgcgtggccatcatccaggccttgcgcgccggcgagttcaccgccctg
gtgggcatcaacctgctgcgggaagggctcgacataccagaggtttccctggtagccatc
ctcgatgcggacaaggagggctttctgcggtccacgcgatcgctcatccagacgttcggc
cgcgctgcgcgcaacgtgggcggccgggtcatcctctatgcggacgccatgacaccctcc
atgcggaacgccatagaggagacggagcgacgccgtgagaagcagcttgcctacaacgag
gagcacggcattaccccggagacggtgaagaaagagctctccaacattctggagagcatc
tacgccggttccaaggacaagacgaaacgggatcgccgccgggaggtcgttctcgccgag
gaaggcgcggactactccatgaacccggccgcggcgagccgcgagatcaagaagctggag
cgcgccatgcgcgaggcggccaaggatctggagttcgagcgcgcagccgagctgcgcgac
cgcatccgcgccatacgcgaaaccttcctcgccccccaggaggattga
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