Oceanidesulfovibrio marinus: E8L03_04820
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Entry
E8L03_04820 CDS
T06743
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dms
Oceanidesulfovibrio marinus
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_04820 (radA)
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E8L03_04820 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_16
DnaB_C
CbiA
ChlI
AAA_22
AAA_14
AAA
AAA_5
nSTAND3
AAA_24
ABC_tran
AAA_33
AAA_30
IstB_IS21
Lon_C
DUF7129
NTPase_1
ATPase_2
KTI12
RecA
AAA_18
MeaB
AAA_31
NACHT
RsgA_GTPase
MMR_HSR1
AAA_29
DAP3
AAA_28
zf-C3HC4_3
RNA_helicase
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QJT08290
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All DBs
Position
complement(1081601..1082977)
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AA seq
458 aa
AA seq
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MAKERTVYVCSSCGARTPQWRGQCPTCREWNTLSETVDRTRTTSSGSGRPPRPAPPPGSG
LPGAPVVLGDLSPDISKPEPTGLGGLDRLLGGGLAPGSAVLLGGPPGVGKSTLLLQLAGA
LAKAGKGVLYISGEESLGQLRGRAERLGALSPGLEALATSRLEDALPALESGEQRLVILD
SVQTVASPRTDGLPGSVGQVRAVAAECLELAKVRGFAIVLVGHVTKEGHIAGPKLLEHMV
DTVLAMEGDKQNTHRILRVLKNRFGSDRELAVFSMEREGLAEVTDPSTLFLEDRDPSLSG
SALAMAVEGNRPFAVEVQALAAKSYLAMPRRTGLGVDVNRLNLLLAVLEKRLSVNLGQWD
IYAKTAGGMRMQDPGMDLALVAAVLSSYYDRPLPPAAVFWGELDLNGRIRPVSGHDIRLE
QARRLGWKPIFCPMSKKSEQGVIVPETLADLQKRLFGA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaaagagcgcacggtgtacgtctgcagctcatgcggcgcgcgtacgccgcaatgg
cgcggacagtgccccacatgccgggagtggaacacactctcggaaaccgtcgacagaact
cgtaccacttcctccggctccggaaggcccccgaggccggctccgccgcccggctccggt
ctgcccggcgcgcccgtcgttctgggcgatctctctcccgacatctccaaaccggaaccc
accggcctgggaggtctcgaccgccttttgggcggcggcctcgcccccggctccgccgtg
ctcctgggtggtccgcccggggtaggtaaatccactttgcttctccagcttgccggcgca
ctggccaaggcaggcaagggcgtgctctacatctccggcgaggagtccctggggcagctt
cgcggccgcgccgaacggctcggcgccttgtcgcccggtctggaggcgctggccacaagc
aggctggaggacgccttgcctgcgctggagtccggcgagcagcggctggtgatcctcgac
tccgtgcagaccgtggcctcgccccggacggacggcctgcccggcagcgtggggcaggtg
cgcgccgtagccgccgagtgcctggagctggccaaggtccgcggtttcgccatcgtcctg
gtgggccacgtgaccaaggagggccacattgccgggcccaagctgctggagcatatggtg
gacacggtgctggccatggagggggacaagcagaacacccaccgtatcctgcgcgtgctt
aagaaccgtttcggctccgaccgcgagctggccgtcttctccatggagcgcgaggggctg
gccgaggtcacggacccgtcgaccctgttcctggaggaccgcgatccttccctgtccggc
tcggccctggccatggccgtggagggcaaccggccctttgccgtggaggtgcaggccctg
gctgccaagagctacctggccatgccgcggcgcaccggcctgggtgtggatgtgaaccgg
ctgaacctcctgctggccgtgctggagaagcgcctttccgtcaacctgggccaatgggac
atctatgccaagaccgcaggcggcatgcgcatgcaggaccccggcatggaccttgccctg
gtggccgcggtgctctcatcctactatgaccggcccctgccgccagcggcggtgttctgg
ggcgagctggacctcaacggccgcattcgtccggtttccggccacgacatccgcctggag
caggcccggcgtctgggctggaagccgatcttctgccccatgtccaaaaagtccgagcaa
ggggtaattgttccggagactttggccgatttgcaaaagcggctgttcggcgcatga
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