Oceanidesulfovibrio marinus: E8L03_05355
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Entry
E8L03_05355 CDS
T06743
Name
(GenBank) GAF domain-containing protein
KO
K02584
Nif-specific regulatory protein
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E8L03_05355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dms03000
]
E8L03_05355
Transcription factors [BR:
dms03000
]
Prokaryotic type
Helix-turn-helix
Other families
E8L03_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA
AAA_5
Mg_chelatase
AAA_3
MCM
Parvo_NS1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QJT08385
LinkDB
All DBs
Position
complement(1202135..1203715)
Genome browser
AA seq
526 aa
AA seq
DB search
MDDVATCAQEIGPYLHTLRKILSVMGPQSSFQSSLKTLLKTLAEDHGMLRPHISIFDPET
KHLKVSLTHAQMKNAQATYEPGQGITGQVFTTGQPVVVPVMKEHPAFLNKAFGRTEEELG
KLAFVCVPVLSPNKDSEGAQEVIGTMSVDIPREPVDMLEAHCRFLEVVAGMIANQAAYLQ
EEIARQKHLIAQGLMAGSSDMDSEAPNIVASSKPMRLVLNQVRQVGPSRATVLLRGESGT
GKELFAEAIHQASPRAEMPLVKLNCAALPSELVESELFGHQKGAFTGAVQNKKGLFELAH
QGTLFLDEIGELSLSAQAKVLRAIQEQEIQRLGSEQTINVDVRVICATHQNLEEQVENGQ
FREDLYYRINVFPIFIPPLRERREDILPMAEHFLKVYAKEYSKDIKRVSTPAIELLNQYD
WPGNVRELKNCLERAVLLCDESVIRTYHLPPTLQTAESSATDTNLSFCDAVAKFEQELLV
DALKKAKGNMLQAARDLRVSYRIVNYKVKKYGLDAKKFSSSGRSKK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtcgcgacctgcgcccaggagatcggaccgtatctgcacaccttgcgcaag
atactctcggtcatgggcccgcaaagctcgtttcagtcgagcctgaagaccttgctcaag
actcttgcggaagatcacggcatgcttcgtccgcacatctcgatctttgatccagagacg
aagcacctcaaggtatcgctcacgcatgcgcagatgaagaatgcccaggccacgtacgaa
cccgggcagggcatcaccggtcaggtgttcaccaccgggcagcctgtggtggtgcctgtg
atgaaagagcatcctgcgtttctgaacaaggccttcggtcggacggaagaggagctggga
aagctcgcctttgtctgcgtgccggtgctcagcccgaacaaggactccgaaggcgcccag
gaagtcatcggcaccatgtcggtggatatcccgcgcgagcccgtagacatgcttgaagcg
cattgccgcttcctcgaagtggtggccggcatgattgccaaccaggcggcgtatctgcag
gaagagatcgcccggcagaagcacctcatcgcgcaggggctcatggccggcagctcggac
atggactccgaggcgcccaacatcgtggcctcctccaagcccatgcgcctggtgctcaac
caggtccggcaggtggggccgtcccgcgccacggtgctgctgcgcggcgagtccggcacg
ggcaaggagctctttgcagaggccatccaccaggccagcccgcgagccgagatgcccctg
gtcaaactgaactgcgcagccctgccgtccgagctggtggagagcgagctcttcggccac
cagaaaggcgctttcaccggcgcggtgcagaacaagaagggcctgttcgagctggcgcac
cagggcacgctgttcctggacgagatcggcgagctgtctctttcggcccaggccaaggtg
ctgcgcgccatccaggagcaggagatccagcgcctgggcagtgagcagaccatcaacgtg
gacgtccgcgtaatctgcgcaacgcaccagaacctcgaagaacaggtggagaacggccag
ttccgcgaggatctctactaccgcatcaacgtcttcccgatcttcattccgccgttgcgt
gaacgccgcgaggatatcctgcccatggccgagcacttcctgaaggtgtacgccaaggag
tacagcaaggacatcaagcgcgtctccacacccgccatcgagctgctcaaccagtacgac
tggccgggtaacgtgcgcgagctgaagaactgtctggagcgcgccgtgctgctctgtgac
gagtccgtgatccgcacctaccacctgccgcctacgctgcagacggcggagagctcggca
accgacacgaacctctcattttgtgatgccgtggccaagttcgagcaggagctgctcgtc
gacgcgctgaaaaaggccaagggcaacatgctccaggcagcgcgcgatctgcgggtgagc
taccgcatcgtgaactacaaagtgaagaagtacgggctggacgcgaagaagttctcatcg
agcggacgctccaaaaaatag
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integrated database retrieval system
