KEGG   Oceanidesulfovibrio marinus: E8L03_06470
Entry
E8L03_06470       CDS       T06743                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
dms  Oceanidesulfovibrio marinus
Pathway
dms03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dms00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E8L03_06470 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dms02044]
    E8L03_06470 (tssH)
Secretion system [BR:dms02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E8L03_06470 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 TniB AAA_7 nSTAND3 ATPase_2 Zeta_toxin AAA_18 AAA_25 AAA_24 Clp_N Sigma54_activat
Other DBs
NCBI-ProteinID: QJT08587
LinkDB
Position
complement(1452864..1455653)
AA seq 929 aa
MLKVDLKRLLERLNPYCMDVMQTAATSTSARGHYEVRIEHVLLVLAEDAANDFGLILAGF
GLDGRELAPLLESTLSALPGGSTGRPVMSPLLIDLLQEAWLVASIELGESALRSGAILLA
LLGSQSVDSSSPAVEYLRRVSREQLAARFEDLVSLSVESAAAERLRDAPAPAGAPGVIPG
PSPTGEYLRRYTVDLCEKAREGSIDPVFGREEELRRLIDILARRRKNNPILVGDAGVGKT
AVVEGLALRMVEDENQPPAERRLPSMLWDVTLVALDVGLLEAGAGLKGEFEDRLQRVLAD
IQASPTPIILFIDEAHTLIGAGGRPGGSDAANLLKPVLARGEIRTIAATTWREYKRYFER
DAALSRRFQPVVLDEPSVHATAQILRGLKPRYEEDHGVTIREDAVEAAAQLAARYITGRF
LPDKAVDLLDTAAARVQLSLSGRPELLDKEERDIEDMRREIEGLMRDRRGGLPVDEKALH
SAWARLDAMKQEARTLRERWRREKLLVERLVTLRGVMSRVARAPGLLRETDPEDVRAELA
ECLVELDRVQGDSPLVRHEVDPDTVARVVSQWTGIPLGKVRRDEAASVLGLKFALRERIR
GQDTALEILTRAIRASKSGLKEPDAPLGVFLLAGPSGVGKTETARAVSEILFGEEASLLA
LSMSEYQERHSVSRLIGSPPGYVGFGEGGVLTDALRRRPYSVVLLDEAEKAHPEILSIFH
QIFDKGRVSDAEGRAVDCRHSLFFLTTTVSDQPDPDADALDNGADAEPERQSPDSAASED
TERRALIERLQPQLAEFFPQALLARTTIVPFLPLSPDALQDIVSLKLTRLAIQAEEGKRM
LLEFSPDVVHAVAHMAAISGSGARGVDNVLRVEVLPRLAEAILRNTGHDQRDSSREPRAQ
RMLRVECTPDDAPTALSWRFSVRELLPEN
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgctcaaagtggacctcaaacgccttctggagcggctcaacccgtactgcatggacgtc
atgcagacggcggccaccagcacatccgcccgcggccactacgaggttcgcatcgagcat
gtgcttctcgtgctcgccgaggatgcggccaacgacttcgggttgatcctggccggtttc
gggctggacggacgcgagcttgcgccgcttctcgaatcgaccctttccgcgctgcccggc
ggctccaccggccgtccggtcatgtccccgctgctcatcgacctcttgcaggaggcatgg
ctcgtcgcctccatcgagctcggcgagtcggccctccgctccggcgcaatcctcctggcc
ctgctcggcagccagtccgtggacagctcgtcaccggccgtggagtacctgcgccgcgtc
agcagggagcagctcgccgcgcggttcgaggatctcgtctccctttccgtggagagcgcc
gcggcagagcggttgcgcgatgctccggcgccggccggcgctcccggcgtcattcccggc
cccagccccaccggcgagtacctgcgccgctacactgttgatctgtgcgagaaggcccgc
gaaggctccatcgacccggtgttcggccgggaggaggagttgcgccggctcatcgatatt
ctggcccgccgccgcaagaacaaccccatcctcgtgggcgacgccggcgtgggcaaaacc
gcggtggtggaagggctggccctgcgcatggtggaggacgagaaccagcccccggccgag
cggcggctgccctccatgctttgggacgtcactctggtggccctggacgtgggcctgctg
gaggccggcgccgggctcaagggcgagttcgaggaccggcttcagcgcgtgctcgccgat
atccaggcctcacccacgcccatcatccttttcatcgacgaggcccacacccttatcggg
gccggcggacggcccggcggcagcgacgctgccaacctgctcaagccggtgctggcccgt
ggcgagatacgcaccatcgccgccaccacctggcgcgagtacaaacgctacttcgagcgc
gacgccgccttgtcgcgccgcttccagccagtggttttggacgagccatcggtgcatgcc
acggcccagatcctccgagggctcaagccccgctacgaggaggaccatggcgtgaccatc
cgcgaggacgccgtggaggcagcggcccagctcgccgcgcgctacatcaccggccgcttc
ctgccggacaaggccgtggatctgctggacaccgcggcggcgcgcgtgcagctcagcctc
tcgggtcggcccgagcttctggacaaggaggagcgggacatcgaggacatgcgccgcgag
atagaaggactcatgcgcgaccgtcggggcgggttgcccgtggacgagaaggctctgcac
tccgcctgggcgcggctcgacgccatgaagcaggaggcccgtaccctgcgtgaacgctgg
cgcagggagaagctgctggtggagcgcctcgtcactctgcgcggggtcatgtcccgcgtg
gccagggctcccggcttgctgcgggagaccgaccccgaggatgtgcgcgccgaactggcc
gaatgtctggtcgagctggatcgcgtgcagggcgactcgccgttggtgcggcacgaggtg
gacccggacaccgtggcccgtgtagtctcgcagtggaccggcatccccctgggcaaggtc
cggcgggacgaggccgcctcggtgctgggcctcaagttcgccctgcgtgagcgcatccgc
ggccaggataccgccctggaaatcctcacccgcgccatccgcgcctccaagtccggcctc
aaggagccggacgcgccgctcggcgtgttcctgctcgccgggccctccggcgtgggcaag
accgagacggcccgcgccgtctccgaaatacttttcggtgaggaagcctcgctgctggcc
ctgtccatgagcgagtaccaggagcgccactccgtctcgcggctcatcggctcgccgccc
ggctacgtgggctttggcgagggcggtgtgctcaccgacgcgctacgccggcggccgtac
tccgtggtgctgctggacgaggcggaaaaggcccaccccgagatactcagcatcttccac
cagattttcgacaagggtcgggtgagcgacgccgagggccgcgctgtggactgccggcac
tcgctcttcttcctgaccaccacggtatcggaccagcccgacccggacgccgacgcgctg
gacaacggcgccgatgccgagccagagcgccagtcgcccgacagcgcagcttccgaggac
acggagcgccgcgccctcattgagcgtctgcagccgcagctcgccgagttcttcccccag
gccctgctggcgcgcaccactatcgtaccgtttctgcccctttccccggacgcgctccag
gacatcgtctccctcaagctcacccgcctcgccatccaggccgaagaaggcaagcgcatg
ctcctggagttctcgccggacgtggtgcacgctgtggcccacatggctgctatcagcggc
agcggcgcgcgcggtgtggacaacgtgctgcgcgtcgaggtgctgccccgcctggccgaa
gccatcctgcgcaacaccggccacgaccagcgcgactccagccgcgaaccccgtgcccaa
cgcatgctgcgcgtggaatgcacgcccgacgacgccccgaccgctctgtcctggcgcttc
tcagtccgggaactcctcccggagaattag

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