Oceanidesulfovibrio marinus: E8L03_06820
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Entry
E8L03_06820 CDS
T06743
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms03030
DNA replication
dms03430
Mismatch repair
dms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E8L03_06820
03430 Mismatch repair
E8L03_06820
03440 Homologous recombination
E8L03_06820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dms03032
]
E8L03_06820
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_06820
Enzymes [BR:
dms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E8L03_06820
DNA replication proteins [BR:
dms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E8L03_06820
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E8L03_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QJT08654
LinkDB
All DBs
Position
complement(1521620..1522363)
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AA seq
247 aa
AA seq
DB search
MIRNQTLPERFAKFMGGLLAPSPSNQLLARNHECFREIDQHKPLEEYEFAVVDTELTGLD
VRRDEIVSIGGVRIRSMELDPSDTFSAIVRPHGDLPKTSTLIHRITPQQVRDRPLLEDVL
PDFVVWLGTSFMVGHHVGLDMRFLNRACRKALGAALKNPGVDTMRLAQVYEAELWESYYD
RYDLNISYHLNDLTTRYGLPAFGRHDALQDALQTAYLFLFLVRKLRQGGIHTLHDLYLAG
RSWRWYL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcaatcagacattgcccgagcgctttgcaaagttcatgggcgggctgctcgcg
ccgtcgccgtcgaatcaattgctggcgaggaaccacgagtgctttcgggagattgatcag
cacaagcctctggaggagtacgagttcgccgtggtggacacggagctgaccggcctggac
gtcagacgcgacgagatcgtctccatcgggggggtgcgcatccgtagcatggagctcgat
ccctccgacacattcagcgccatcgtgcggccgcacggcgatctgcccaagacgtccaca
ctgatccaccgcatcacgccacagcaggtccgggaccggccgctgctggaggatgtgctg
ccggatttcgtggtatggctggggacgagctttatggtgggccaccacgtgggcctggac
atgcgctttctgaaccgcgcctgccgcaaggcgttgggggcggcgctgaagaatccgggc
gtggacaccatgcgtctggcccaggtgtacgaggccgagctctgggagtcgtactacgac
cgctacgacctgaacatctcgtatcatctcaacgacctgaccacgcgctacgggctgccg
gcctttggccggcacgacgccctgcaggacgcgttgcagacggcgtatctgttcctcttc
ctggtgcggaagcttcggcagggaggcatccacaccctgcacgacctctatctggccggt
cggagctggcggtggtacctctag
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