KEGG   Oceanidesulfovibrio marinus: E8L03_06820
Entry
E8L03_06820       CDS       T06743                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dms  Oceanidesulfovibrio marinus
Pathway
dms03030  DNA replication
dms03430  Mismatch repair
dms03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dms00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E8L03_06820
   03430 Mismatch repair
    E8L03_06820
   03440 Homologous recombination
    E8L03_06820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dms03032]
    E8L03_06820
   03400 DNA repair and recombination proteins [BR:dms03400]
    E8L03_06820
Enzymes [BR:dms01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E8L03_06820
DNA replication proteins [BR:dms03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     E8L03_06820
DNA repair and recombination proteins [BR:dms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     E8L03_06820
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QJT08654
LinkDB
Position
complement(1521620..1522363)
AA seq 247 aa
MIRNQTLPERFAKFMGGLLAPSPSNQLLARNHECFREIDQHKPLEEYEFAVVDTELTGLD
VRRDEIVSIGGVRIRSMELDPSDTFSAIVRPHGDLPKTSTLIHRITPQQVRDRPLLEDVL
PDFVVWLGTSFMVGHHVGLDMRFLNRACRKALGAALKNPGVDTMRLAQVYEAELWESYYD
RYDLNISYHLNDLTTRYGLPAFGRHDALQDALQTAYLFLFLVRKLRQGGIHTLHDLYLAG
RSWRWYL
NT seq 744 nt   +upstreamnt  +downstreamnt
atgattcgcaatcagacattgcccgagcgctttgcaaagttcatgggcgggctgctcgcg
ccgtcgccgtcgaatcaattgctggcgaggaaccacgagtgctttcgggagattgatcag
cacaagcctctggaggagtacgagttcgccgtggtggacacggagctgaccggcctggac
gtcagacgcgacgagatcgtctccatcgggggggtgcgcatccgtagcatggagctcgat
ccctccgacacattcagcgccatcgtgcggccgcacggcgatctgcccaagacgtccaca
ctgatccaccgcatcacgccacagcaggtccgggaccggccgctgctggaggatgtgctg
ccggatttcgtggtatggctggggacgagctttatggtgggccaccacgtgggcctggac
atgcgctttctgaaccgcgcctgccgcaaggcgttgggggcggcgctgaagaatccgggc
gtggacaccatgcgtctggcccaggtgtacgaggccgagctctgggagtcgtactacgac
cgctacgacctgaacatctcgtatcatctcaacgacctgaccacgcgctacgggctgccg
gcctttggccggcacgacgccctgcaggacgcgttgcagacggcgtatctgttcctcttc
ctggtgcggaagcttcggcagggaggcatccacaccctgcacgacctctatctggccggt
cggagctggcggtggtacctctag

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