Oceanidesulfovibrio marinus: E8L03_10020
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Entry
E8L03_10020 CDS
T06743
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E8L03_10020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_10020
Enzymes [BR:
dms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
E8L03_10020
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E8L03_10020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QJT09253
UniProt:
A0ABX6NF91
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All DBs
Position
complement(2255489..2256433)
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AA seq
314 aa
AA seq
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MPEQGTTEKQSTAAQPANVLMLGAHMSVAGGLDTAFGRIRKVRGTALQLFTRNQRTWKDA
PMDEAEVEAFRSAWAEWGPYPVASHASYLINLASPKPEIVEKSVASLAREIYRCARLGVT
DIVLHPGAPQEAGPEAGIAAVARGLDAAFAMAGEMLAKEGAAVHAEPKVLLEITAGQGST
LGSTFAELAAIIAAAENESRLGICVDTCHAFAAGYDLSTPAGLSKTLAEMDAAGLRGRLG
LLHLNDSKTELGSRKDRHTHIGEGFIGVEGFAGVVKDPYLRTIPMVIEMPKGENLEYDFK
NLGLLRQLAGIAKE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcaagggacaacggaaaaacaaagcacggcggcgcagcccgcgaacgtattg
atgctcggcgcgcacatgagcgtggctggtgggctggacacggcgttcggacgcatacgc
aaggtccggggcacggccctgcagctctttacccgcaaccagcggacgtggaaggacgcg
cccatggacgaggccgaggtggaggccttccgctcggcctgggccgagtggggaccgtac
cccgtggcctcgcacgcctcctatcttatcaacctggccagccccaagccggagatcgtg
gagaagtccgtggcctcgctggcgcgggaaatctaccgctgcgcacggctgggcgtgacc
gacatcgtgctgcaccccggcgcgccgcaggaggccgggccggaggcaggcattgccgcc
gttgccagggggttggacgcggccttcgccatggccggagagatgctggccaaagaaggc
gcggctgtgcacgccgagcccaaagtgcttctggagatcacggccgggcagggctccacc
ctgggtagcacctttgccgagctcgccgcgatcatcgctgcggcagaaaacgagtcgcgg
ctgggcatctgcgtggatacgtgccacgcctttgccgccggatacgacctgtccacgccg
gctggtttatcaaagaccctggcggagatggacgccgccggcctgcgggggcggctgggc
ctgctgcatctgaacgactccaagaccgagctcgggtccagaaaagacaggcacacccac
atcggcgaagggttcatcggtgtggaaggatttgccggagtcgtcaaagacccgtacctg
cggaccatccccatggtcatagagatgcccaagggcgagaatctggagtacgacttcaaa
aatctgggtctgctgcggcaacttgctggtattgcaaaggaatga
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