Oceanidesulfovibrio marinus: E8L03_11285
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Entry
E8L03_11285 CDS
T06743
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms03420
Nucleotide excision repair
dms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E8L03_11285
03430 Mismatch repair
E8L03_11285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dms03400
]
E8L03_11285
Enzymes [BR:
dms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E8L03_11285
DNA repair and recombination proteins [BR:
dms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E8L03_11285
MMR (mismatch excision repair)
Other MMR factors
E8L03_11285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
RecR_HhH
PcrA_UvrD_tudor
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QJT09486
UniProt:
A0A6P1ZFX8
LinkDB
All DBs
Position
complement(2558183..2560363)
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AA seq
726 aa
AA seq
DB search
MPRDYSSSLNPSQLEAVYATEGPVLVIAGAGSGKTRTIVYRLAHLVEEGVDPSSILLLTF
TRKASQEMLQRASDLLGEGRGLGRVQGGTFHAFAYGMLRRYTPPGWPERLTVIDRSDAES
LIREAKGELGFGKGDRSFPKASTILDNVSKSRNKEQQLRDIVSNESFHLLPYVDEIETMS
VEYEKKKKQCGMLDYDDLLFALETLLRSDEALLSNIRDRFKHVMVDEYQDTNLVQARLVE
LIAGKHGNVMAVGDDAQSIYSFRGANVQNILSFPQVFPGTKTIRLERNYRSTQPILSFTN
QILAQSSILYEKKLWTEDSGGAVPQIVRPLSDLSQARLVAGKVVELMKEHSPGEVAVLFR
AGYQSYHLEVELNKLGIRFAKFGGLKYTEAAHIKDVLSFVRILRNPSDTPSWHRVLAPIK
GVGPKTSQKLVTSLLSGDRDFVDSWRKKRPDLDALLGFLDELRSREMSPGTLLERIVEFY
TPQLEERYPDDYPRREAGLEELLQIAAGYSELDLFLADLSLENPEPRGSEREDVVTLSTI
HSSKGLEWNAVCIIDLIEDRFPSRHAMNRVEEFEEERRLLYVACTRARQYLALFVPKAVY
RRGKEITEPATASPFVREIAGEFYEEWQENYTGGLSMAKGAPEYRRPPSALTPPSGAPSA
GSRSSSSSPKPAPAPAPDPSKMGFCNHKVFGRGKIVAVIPPDKYRVNFPGFGLKVILAQY
LELENT
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcctagagattatagctcatcgctcaatcccagccagctggaggccgtgtacgccacc
gaaggccctgtgctggtcatcgccggcgccggctccggcaagacgcgcaccattgtctac
cgcctggcgcatctggtggaggagggtgtggacccgtcctccatcctgttgctcaccttc
actcgcaaggccagccaggagatgctccagcgcgcctcggacctgctcggcgaaggccgc
ggcctgggccgtgtgcagggcggtaccttccatgcctttgcctatggcatgctgcgacgg
tacacgccgccgggctggccggagcgtctcacggtcatcgaccgctcggacgccgagtcg
ctcatccgcgaggccaagggcgagctcggttttggcaagggcgaccgttccttccccaag
gcgtctacaattctggacaacgtgagcaagtcccgcaacaaggagcagcagctccgggac
atcgtctccaacgaatcgttccacctcctgccgtacgttgacgagatcgagacgatgtct
gtcgagtatgagaagaaaaagaagcagtgcgggatgttggattacgatgatctgctcttc
gccctggagacgctgctgcgatcggacgaggcgctgctgtccaatattcgagacagattc
aagcacgtgatggtggatgagtaccaggacacgaacctggtccaggcgcggttggtggag
ctcattgccggcaagcacggcaatgtgatggccgtgggcgacgacgcgcagtccatctac
tccttccgcggcgccaacgtgcagaacatcctcagctttccgcaggtttttccgggtacc
aagaccatccggctggagcgcaactaccgctccacccagcccatcctcagttttaccaac
cagattctcgcccagtcctcgatcctgtacgagaaaaagctctggacagaggactccggc
ggcgcggtgccgcagatcgtgcggccgctttccgacctgtcccaggcgcggctcgtggcc
ggcaaggtagtggagctgatgaaagagcactccccgggcgaggtggccgtgctctttcgc
gccggctaccagtcataccacctggaggtggagctcaataaactgggcatccgcttcgcc
aagttcggcgggctcaagtacacggaagccgcgcatatcaaggacgtgctcagcttcgtg
cgcatcctgcgcaacccctcggacaccccgtcgtggcaccgtgtactcgcgcccatcaag
ggcgtggggcccaagacttcgcaaaagctcgtgacctcgctgctctccggtgatcgcgac
ttcgtggattcctggcgcaaaaagcggccggatctggatgcgctgctgggctttctggac
gagctgcgctcccgcgagatgtcgcccggcacgctgctcgaacgcatcgtggagttctac
acgccgcagttggaggagcgctaccccgacgactatccccgccgcgaggccgggctggag
gagctgttgcagatagccgccgggtactcggagctcgaccttttcctggccgacctgagc
ctggagaacccggagccccgcgggtccgagcgcgaggacgtggtcaccctctccaccatc
cactcgtcaaaagggctggagtggaatgcggtctgcatcatcgacctcatcgaggaccgc
ttcccctcgcgccacgccatgaaccgcgtggaggagttcgaggaggagcggcgcttgctg
tacgtggcctgcacgcgtgcccggcagtatctggcgctgttcgtgcccaaggccgtgtac
cgacgcggcaaggagatcaccgagccggccacggcctcgccgtttgtgcgggaaattgcc
ggcgagttctacgaggagtggcaggagaactacacgggcgggctttccatggccaagggc
gcgccggagtaccgccgcccgccgtccgcattgacgccgccgtctggtgcgccatccgcc
ggcagtcgctcttcttcctcgtcgccgaaaccggccccggctccggcgccggaccccagc
aaaatgggcttctgcaaccacaaggtctttggccgcggcaagatcgtggctgtgatcccg
ccggacaagtaccgggtcaacttccctggcttcggcctcaaggtcattctggcgcagtac
ctggagctggaaaacacgtga
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