KEGG   Oceanidesulfovibrio marinus: E8L03_11500
Entry
E8L03_11500       CDS       T06743                                 
Name
(GenBank) GAF domain-containing protein
  KO
K02584  Nif-specific regulatory protein
Organism
dms  Oceanidesulfovibrio marinus
Pathway
dms02020  Two-component system
Brite
KEGG Orthology (KO) [BR:dms00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    E8L03_11500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dms03000]
    E8L03_11500
Transcription factors [BR:dms03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    E8L03_11500
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 GAF HTH_8 GAF_2 AAA_5 AAA_2 Mg_chelatase HTH_50 RsgA_GTPase GAF_3 Parvo_NS1 bpMoxR AAA HTH_30 AAA_16 IstB_IS21 nSTAND3
Other DBs
NCBI-ProteinID: QJT09525
LinkDB
Position
2607059..2608702
AA seq 547 aa
MPDRCSEEEKLKECSTGVCRGKIVPLLHDMGRALSEEEDLDMALEHLLRYLKEQMGMQRI
MINLYHRETGRIFIHKSDGLTKQEQALGIYFPGEGITGRVVATAAPIVVPSIRDEPDFLN
RTGSLVKDSADDMSFLCVPILRGKKVMGTISAERGYDNELMLDKHRDALMVISYMLAQAV
ELYLVEKVDKVLWKRQALELMDELKTRFRPSNMIGTSKAMMEVYALLRKVAGTRTTVLLL
GESGVGKELLANAIHYYGARPDGPVVKFNCAALPESILESELFGHEKGSFTGATQLRKGR
FEEADGGTIFLDEVGELPLGVQAKLLRVLQERTFERVGGNESIAVDIRIVAATNKDLAAM
VAAGTFREDLYYRLNVFPVLVPPLRERGSDIITIAEHFAAGFAEENGKTINRIATPALNM
LMSYHWPGNVRELENVIQRAVILTEDDAIHGYNLPLSLQSPAFPEAGSKCGILETRLAAV
EYEMLVEALRLHQGNTTEAARALGLTRRTMGLRMRKYDLSYKQFRRSDSSAPEPGATDRS
GESLTLE
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgcctgacaggtgctcggaagaagaaaaactcaaggaatgctcgaccggcgtatgccgg
ggcaagatcgttccgttgttgcatgacatgggccgggccctctctgaagaagaggacctg
gacatggccctggagcatttgctgcgctatctcaaagagcagatgggcatgcagcgcatc
atgatcaacctgtaccatcgcgagaccgggcgtatctttatccacaagagcgacggactg
accaagcaggagcaggccctggggatatacttcccgggcgagggaattacaggacgggtc
gtggccacggccgcgcccatcgtggtgccgagcatcagggacgagccggacttcctcaac
aggaccggcagcctggtcaaggactcagccgacgacatgtcctttctgtgcgtgcccatt
cttcgcgggaagaaggtgatgggcaccatcagcgccgagcggggctacgacaacgagctg
atgctggacaagcatcgcgacgcactcatggtcatctcgtacatgctggcccaggccgtg
gagctctacctggtggagaaggtggacaaggtgctctggaagcgccaggcgctggaactg
atggacgagctgaagacgcgcttcaggccctcgaacatgatcggcacctccaaggccatg
atggaagtctacgcgttgttgcgtaaggtggccggcaccaggaccacggttcttctgctc
ggcgagagcggcgtgggcaaggagctgctggccaacgccatccattattatggagccagg
ccggacgggcccgtggtaaagttcaactgcgccgccctgccggagagcattctggagagc
gagctgttcggccacgagaaaggctccttcaccggagccacgcagctgcgcaagggccgg
ttcgaagaggcggacgggggcaccatcttcctggacgaggtgggggagctgcctctgggc
gtgcaggcaaagctgctgcgcgtactgcaggaacgcaccttcgagcgcgtgggcggcaac
gagtccatcgcggtcgacatccgcatcgtggccgccacgaacaaggaccttgccgccatg
gttgcggccggcacgttccgcgaggatctctattaccggctcaacgtatttccggtgctg
gtgccgccgctccgcgaacggggcagcgacatcatcaccattgccgagcattttgccgcc
gggtttgccgaggagaacggcaagaccatcaaccgcatcgccacaccggccctgaacatg
ctcatgagctaccactggcccggcaacgtacgggagcttgaaaacgtgatccaacgcgcc
gtgattctgaccgaggacgacgccatccatggatacaacctgccgctttcattgcagtcg
ccggcgtttcccgaggccgggagcaaatgcgggatactggagacgcgtctcgcggcggtc
gagtatgagatgctggtggaggccctgcgcctgcatcagggcaacaccacggaagcggca
cgcgctctgggcctgacccggcggaccatggggctgcgcatgcgcaagtacgacctgagc
tacaagcagttccgccggtccgactcttcggctccggagcccggcgcgacggatcgttct
ggcgagagcctgacgctggaataa

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