Oceanidesulfovibrio marinus: E8L03_11500
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Entry
E8L03_11500 CDS
T06743
Name
(GenBank) GAF domain-containing protein
KO
K02584
Nif-specific regulatory protein
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E8L03_11500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dms03000
]
E8L03_11500
Transcription factors [BR:
dms03000
]
Prokaryotic type
Helix-turn-helix
Other families
E8L03_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA_2
Mg_chelatase
HTH_50
RsgA_GTPase
GAF_3
Parvo_NS1
bpMoxR
AAA
HTH_30
AAA_16
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QJT09525
LinkDB
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Position
2607059..2608702
Genome browser
AA seq
547 aa
AA seq
DB search
MPDRCSEEEKLKECSTGVCRGKIVPLLHDMGRALSEEEDLDMALEHLLRYLKEQMGMQRI
MINLYHRETGRIFIHKSDGLTKQEQALGIYFPGEGITGRVVATAAPIVVPSIRDEPDFLN
RTGSLVKDSADDMSFLCVPILRGKKVMGTISAERGYDNELMLDKHRDALMVISYMLAQAV
ELYLVEKVDKVLWKRQALELMDELKTRFRPSNMIGTSKAMMEVYALLRKVAGTRTTVLLL
GESGVGKELLANAIHYYGARPDGPVVKFNCAALPESILESELFGHEKGSFTGATQLRKGR
FEEADGGTIFLDEVGELPLGVQAKLLRVLQERTFERVGGNESIAVDIRIVAATNKDLAAM
VAAGTFREDLYYRLNVFPVLVPPLRERGSDIITIAEHFAAGFAEENGKTINRIATPALNM
LMSYHWPGNVRELENVIQRAVILTEDDAIHGYNLPLSLQSPAFPEAGSKCGILETRLAAV
EYEMLVEALRLHQGNTTEAARALGLTRRTMGLRMRKYDLSYKQFRRSDSSAPEPGATDRS
GESLTLE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacaggtgctcggaagaagaaaaactcaaggaatgctcgaccggcgtatgccgg
ggcaagatcgttccgttgttgcatgacatgggccgggccctctctgaagaagaggacctg
gacatggccctggagcatttgctgcgctatctcaaagagcagatgggcatgcagcgcatc
atgatcaacctgtaccatcgcgagaccgggcgtatctttatccacaagagcgacggactg
accaagcaggagcaggccctggggatatacttcccgggcgagggaattacaggacgggtc
gtggccacggccgcgcccatcgtggtgccgagcatcagggacgagccggacttcctcaac
aggaccggcagcctggtcaaggactcagccgacgacatgtcctttctgtgcgtgcccatt
cttcgcgggaagaaggtgatgggcaccatcagcgccgagcggggctacgacaacgagctg
atgctggacaagcatcgcgacgcactcatggtcatctcgtacatgctggcccaggccgtg
gagctctacctggtggagaaggtggacaaggtgctctggaagcgccaggcgctggaactg
atggacgagctgaagacgcgcttcaggccctcgaacatgatcggcacctccaaggccatg
atggaagtctacgcgttgttgcgtaaggtggccggcaccaggaccacggttcttctgctc
ggcgagagcggcgtgggcaaggagctgctggccaacgccatccattattatggagccagg
ccggacgggcccgtggtaaagttcaactgcgccgccctgccggagagcattctggagagc
gagctgttcggccacgagaaaggctccttcaccggagccacgcagctgcgcaagggccgg
ttcgaagaggcggacgggggcaccatcttcctggacgaggtgggggagctgcctctgggc
gtgcaggcaaagctgctgcgcgtactgcaggaacgcaccttcgagcgcgtgggcggcaac
gagtccatcgcggtcgacatccgcatcgtggccgccacgaacaaggaccttgccgccatg
gttgcggccggcacgttccgcgaggatctctattaccggctcaacgtatttccggtgctg
gtgccgccgctccgcgaacggggcagcgacatcatcaccattgccgagcattttgccgcc
gggtttgccgaggagaacggcaagaccatcaaccgcatcgccacaccggccctgaacatg
ctcatgagctaccactggcccggcaacgtacgggagcttgaaaacgtgatccaacgcgcc
gtgattctgaccgaggacgacgccatccatggatacaacctgccgctttcattgcagtcg
ccggcgtttcccgaggccgggagcaaatgcgggatactggagacgcgtctcgcggcggtc
gagtatgagatgctggtggaggccctgcgcctgcatcagggcaacaccacggaagcggca
cgcgctctgggcctgacccggcggaccatggggctgcgcatgcgcaagtacgacctgagc
tacaagcagttccgccggtccgactcttcggctccggagcccggcgcgacggatcgttct
ggcgagagcctgacgctggaataa
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